RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 ARHGAP22Q7Z5H3 698 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 CLEC18CQ8NCF0 446 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 ARRDC2Q8TBH0 407 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 HSPH1Q92598 858 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 EID2BQ96D98 161 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 RTP4Q96DX8 246 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 NAP1L5Q96NT1 182 aaPredicted RBP13.29□□□□□ -0.28
DDX41-210ENST00000509576 DDA1Q9BW61 102 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 ISCUQ9H1K1 167 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 NT5MQ9NPB1 228 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.29□□□□□ -0.28
DDX41-210ENST00000509576 GOLGA6AQ9NYA3 693 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 DTLQ9NZJ0 730 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 AIPL1Q9NZN9 384 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 MYO1AQ9UBC5 1043 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 TBC1D29Q9UFV1 150 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 SPTAN1Q13813 2472 aaKnown RBP13.29□□□□□ -0.28
DDX41-210ENST00000509576 A0A0J9YYE9 177 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 A8MU76 341 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 B4E171 279 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 PDE2AO00408 941 aaPredicted RBP13.28□□□□□ -0.28
DDX41-210ENST00000509576 INPP4BO15327 924 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 PPFIA2O75334 1257 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 TRBC1P01850 177 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 GZMAP12544 262 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 PCK1P35558 622 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 TSPAN7P41732 249 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 GPR1P46091 355 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 KCNAB2Q13303 367 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 TRA2AQ13595 282 aaKnown RBP eCLIP13.28□□□□□ -0.281e-6■□□□□ 9.3
DDX41-210ENST00000509576 CLPPQ16740 277 aaPredicted RBP13.28□□□□□ -0.28
DDX41-210ENST00000509576 HGSNATQ68CP4 663 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 TMEM71Q6P5X7 295 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 TMCO3Q6UWJ1 677 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 CACNA2D3Q8IZS8 1091 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.28□□□□□ -0.28
DDX41-210ENST00000509576 LZTR1Q8N653 840 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 AGBL5Q8NDL9 886 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 ZNF564Q8TBZ8 553 aaPredicted RBP13.28□□□□□ -0.28
DDX41-210ENST00000509576 FAM71BQ8TC56 605 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 AP2M1Q96CW1 435 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 RIOK2Q9BVS4 552 aaKnown RBP13.28□□□□□ -0.28
DDX41-210ENST00000509576 BRD8Q9H0E9 1235 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 CDH19Q9H159 772 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 SLC39A1Q9NY26 324 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 KCNK4Q9NYG8 393 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 DONSONQ9NYP3 566 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 OGFRQ9NZT2 677 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 MYO6Q9UM54 1294 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 PCDHB11Q9Y5F2 797 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 MRPS18BQ9Y676 258 aaKnown RBP13.28□□□□□ -0.28
DDX41-210ENST00000509576 ICE1Q9Y2F5 2266 aa13.28□□□□□ -0.28
DDX41-210ENST00000509576 SHANK1Q9Y566 2161 aa13.27□□□□□ -0.28
DDX41-210ENST00000509576 H3BRJ5 948 aa13.27□□□□□ -0.29
DDX41-210ENST00000509576 RNF8O76064 485 aa13.27□□□□□ -0.29
DDX41-210ENST00000509576 CLDN7O95471 211 aa13.27□□□□□ -0.29
DDX41-210ENST00000509576 DLGAP3O95886 979 aa13.27□□□□□ -0.29
DDX41-210ENST00000509576 TPM2P07951 284 aa13.27□□□□□ -0.29
DDX41-210ENST00000509576 MMP2P08253 660 aa13.27□□□□□ -0.29
DDX41-210ENST00000509576 CYP2A6P11509 494 aaPredicted RBP13.27□□□□□ -0.29
DDX41-210ENST00000509576 ZNF28P17035 718 aa13.27□□□□□ -0.29
DDX41-210ENST00000509576 HSPA9P38646 679 aaKnown RBP13.27□□□□□ -0.29
DDX41-210ENST00000509576 ASIC2Q16515 512 aa13.27□□□□□ -0.29
DDX41-210ENST00000509576 STX1AQ16623 288 aa13.27□□□□□ -0.29
DDX41-210ENST00000509576 SNAP47Q5SQN1 464 aa13.27□□□□□ -0.29
DDX41-210ENST00000509576 ZNF648Q5T619 568 aaPredicted RBP13.27□□□□□ -0.29
DDX41-210ENST00000509576 ARMC12Q5T9G4 340 aa13.27□□□□□ -0.29
DDX41-210ENST00000509576 NCBP2-AS2Q69YL0 99 aa13.27□□□□□ -0.29
DDX41-210ENST00000509576 BORAQ6PGQ7 559 aa13.27□□□□□ -0.29
DDX41-210ENST00000509576 FAM129CQ86XR2 697 aa13.27□□□□□ -0.29
DDX41-210ENST00000509576 PAF1Q8N7H5 531 aa13.27□□□□□ -0.29
DDX41-210ENST00000509576 MAML1Q92585 1016 aa13.27□□□□□ -0.29
DDX41-210ENST00000509576 TBC1D10AQ9BXI6 508 aa13.27□□□□□ -0.29
DDX41-210ENST00000509576 ARFGAP3Q9NP61 516 aa13.27□□□□□ -0.29
DDX41-210ENST00000509576 SIDT1Q9NXL6 827 aaKnown RBP13.27□□□□□ -0.29
DDX41-210ENST00000509576 SCHIP1Q9P0W5 487 aaPredicted RBP13.27□□□□□ -0.29
DDX41-210ENST00000509576 KCNK6Q9Y257 313 aa13.27□□□□□ -0.29
DDX41-210ENST00000509576 CHKBQ9Y259 395 aa13.27□□□□□ -0.29
DDX41-210ENST00000509576 ADGRG1Q9Y653 693 aa13.27□□□□□ -0.29
DDX41-210ENST00000509576 SPTBP11277 2137 aa13.27□□□□□ -0.29
DDX41-210ENST00000509576 HLA-DQB2P05538 268 aa13.26□□□□□ -0.29
DDX41-210ENST00000509576 FURINP09958 794 aa13.26□□□□□ -0.29
DDX41-210ENST00000509576 PRKAR1AP10644 381 aa13.26□□□□□ -0.29
DDX41-210ENST00000509576 NR1D1P20393 614 aa13.26□□□□□ -0.29
DDX41-210ENST00000509576 GFERP55789 205 aa13.26□□□□□ -0.29
DDX41-210ENST00000509576 FOXK1P85037 733 aa13.26□□□□□ -0.29
DDX41-210ENST00000509576 MC2RQ01718 297 aa13.26□□□□□ -0.29
DDX41-210ENST00000509576 SLC10A2Q12908 348 aaPredicted RBP13.26□□□□□ -0.29
DDX41-210ENST00000509576 HENMT1Q5T8I9 393 aaKnown RBP13.26□□□□□ -0.29
DDX41-210ENST00000509576 TMEM164Q5U3C3 297 aa13.26□□□□□ -0.29
DDX41-210ENST00000509576 MARC1Q5VT66 337 aa13.26□□□□□ -0.29
DDX41-210ENST00000509576 ZNF765Q7L2R6 523 aa13.26□□□□□ -0.29
DDX41-210ENST00000509576 ATPAF2Q8N5M1 289 aa13.26□□□□□ -0.29
DDX41-210ENST00000509576 IL22RA1Q8N6P7 574 aa13.26□□□□□ -0.29
DDX41-210ENST00000509576 ZSCAN1Q8NBB4 408 aa13.26□□□□□ -0.29
DDX41-210ENST00000509576 SLC45A3Q96JT2 553 aa13.26□□□□□ -0.29
DDX41-210ENST00000509576 TDRD1Q9BXT4 1180 aaKnown RBP13.26□□□□□ -0.29
DDX41-210ENST00000509576 TEX15Q9BXT5 2789 aa13.26□□□□□ -0.29
DDX41-210ENST00000509576 THAP2Q9H0W7 228 aa13.26□□□□□ -0.29
DDX41-210ENST00000509576 ADNPQ9H2P0 1102 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms