RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 MPP5Q8N3R9 675 aa12.78□□□□□ -0.36
TCOF1-210ENST00000506767 LRRN4CLQ8ND94 238 aa12.78□□□□□ -0.36
TCOF1-210ENST00000506767 PPHLN1Q8NEY8 458 aaKnown RBP12.78□□□□□ -0.36
TCOF1-210ENST00000506767 OR13J1Q8NGT2 312 aa12.78□□□□□ -0.36
TCOF1-210ENST00000506767 PTCD2Q8WV60 388 aaKnown RBP12.78□□□□□ -0.36
TCOF1-210ENST00000506767 RUBCNQ92622 972 aa12.78□□□□□ -0.36
TCOF1-210ENST00000506767 ART4Q93070 314 aa12.78□□□□□ -0.36
TCOF1-210ENST00000506767 FUBP1Q96AE4 644 aaKnown RBP12.78□□□□□ -0.36
TCOF1-210ENST00000506767 DNAJC1Q96KC8 554 aaKnown RBP12.78□□□□□ -0.36
TCOF1-210ENST00000506767 ZNF778Q96MU6 729 aa12.78□□□□□ -0.36
TCOF1-210ENST00000506767 ZSCAN5AQ9BUG6 496 aa12.78□□□□□ -0.36
TCOF1-210ENST00000506767 MRM3Q9HC36 420 aaKnown RBP12.78□□□□□ -0.36
TCOF1-210ENST00000506767 CHRAC1Q9NRG0 131 aa12.78□□□□□ -0.36
TCOF1-210ENST00000506767 TREX1Q9NSU2 369 aa12.78□□□□□ -0.36
TCOF1-210ENST00000506767 NCDNQ9UBB6 729 aa12.78□□□□□ -0.36
TCOF1-210ENST00000506767 CNOT6Q9ULM6 557 aaKnown RBP12.78□□□□□ -0.36
TCOF1-210ENST00000506767 SOX13Q9UN79 622 aa12.78□□□□□ -0.36
TCOF1-210ENST00000506767 GLYATL1P3A0A0U1RQE8 302 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 SPTY2D1-AS1A0A0U1RR47 76 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 A0A1B0GVT2 93 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 MAGEB16A2A368 324 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 AGAP14A8MT82 685 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 KHNYNO15037 678 aaKnown RBP12.77□□□□□ -0.37
TCOF1-210ENST00000506767 MAGEC1O60732 1142 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 CTSKP43235 329 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 GPR1P46091 355 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 NXPH1P58417 271 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 KIAA1024LP59773 190 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 IRX4P78413 519 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 SPEM2Q0P670 501 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 CALCOCO2Q13137 446 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 PEX6Q13608 980 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 CSRP2Q16527 193 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 SKIDA1Q1XH10 827 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 MSS51Q4VC12 460 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 TPRG1LQ5T0D9 272 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 ALS2CLQ60I27 953 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 RAET1GQ6H3X3 334 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 ZDHHC24Q6UX98 284 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 PTAR1Q7Z6K3 402 aaPredicted RBP12.77□□□□□ -0.37
TCOF1-210ENST00000506767 SKA1Q96BD8 255 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 CDKN2AIPNLQ96HQ2 116 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 COX14Q96I36 57 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 VPS35Q96QK1 796 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 HINFPQ9BQA5 517 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 LGR4Q9BXB1 951 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 SPATA16Q9BXB7 569 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 SMOC1Q9H4F8 434 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 PARD6AQ9NPB6 346 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 SEMA4GQ9NTN9 838 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 SLC2A6Q9UGQ3 507 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 FKBPLQ9UIM3 349 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 APPL1Q9UKG1 709 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 TMPRSS11EQ9UL52 423 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 ANKRD6Q9Y2G4 727 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 OR1A2Q9Y585 309 aa12.77□□□□□ -0.37
TCOF1-210ENST00000506767 TP53BP1Q12888 1972 aaPredicted RBP12.77□□□□□ -0.37
TCOF1-210ENST00000506767 RALGAPA1Q6GYQ0 2036 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 CFAP54Q96N23 3096 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 SDK1Q7Z5N4 2213 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 FAM237BA0A1B0GVD1 139 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 E7ESA3 106 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 CCL22O00626 93 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 ARHGAP33O14559 1287 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 SRP72O76094 671 aaKnown RBP12.76□□□□□ -0.37
TCOF1-210ENST00000506767 CFIP05156 583 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 MYCLP1P12525 358 aaPredicted RBP12.76□□□□□ -0.37
TCOF1-210ENST00000506767 NMBRP28336 390 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 ARSDP51689 593 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 C21orf59P57076 290 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 TMPRSS15P98073 1019 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 CDK3Q00526 305 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 GUCY2DQ02846 1103 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 CAV1Q03135 178 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 DHX9Q08211 1270 aaKnown RBP12.76□□□□□ -0.37
TCOF1-210ENST00000506767 PDE1CQ14123 709 aaPredicted RBP12.76□□□□□ -0.37
TCOF1-210ENST00000506767 FZD2Q14332 565 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 NFATC4Q14934 902 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 CHRNA6Q15825 494 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 KIF19Q2TAC6 998 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 ATP13A5Q4VNC0 1218 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 TCEAL6Q6IPX3 200 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 FAM151BQ6UXP7 276 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 TMEM135Q86UB9 458 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 HEATR4Q86WZ0 1026 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 PDIK1LQ8N165 341 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 DCLK2Q8N568 766 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 BTN2A2Q8WVV5 523 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 TCEAL3Q969E4 200 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 SGSM3Q96HU1 749 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 HIC2Q96JB3 615 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 TBATAQ96M53 351 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 PWWP2AQ96N64 755 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 NUSAP1Q9BXS6 441 aaKnown RBP12.76□□□□□ -0.37
TCOF1-210ENST00000506767 ZDHHC5Q9C0B5 715 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 WDR26Q9H7D7 661 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 ERVMER34-1Q9H9K5 563 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 EPB41L5Q9HCM4 733 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 SNX11Q9Y5W9 270 aa12.76□□□□□ -0.37
TCOF1-210ENST00000506767 ADAMTS9Q9P2N4 1935 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms