RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 IVLP07476 585 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 ADCY8P40145 1251 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 CD86P42081 329 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 MAGEA1P43355 309 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 NOP2P46087 812 aaKnown RBP11.9□□□□□ -0.5
MED28-203ENST00000503945 CTBSQ01459 385 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 IHHQ14623 411 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 DOK6Q6PKX4 331 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 SLC30A9Q6PML9 568 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 ADAMTSL4Q6UY14 1074 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 RFLNAQ6ZTI6 216 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 ZNF765Q7L2R6 523 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 NT5DC3Q86UY8 548 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 PIM3Q86V86 326 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 PLD5Q8N7P1 536 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 LPCAT1Q8NF37 534 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 SNRNP27Q8WVK2 155 aaKnown RBP11.9□□□□□ -0.5
MED28-203ENST00000503945 TMEM159Q96B96 161 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 RNF25Q96BH1 459 aaPredicted RBP11.9□□□□□ -0.5
MED28-203ENST00000503945 LIN37Q96GY3 246 aaPredicted RBP11.9□□□□□ -0.5
MED28-203ENST00000503945 RIOK2Q9BVS4 552 aaKnown RBP11.9□□□□□ -0.5
MED28-203ENST00000503945 TDRD1Q9BXT4 1180 aaKnown RBP11.9□□□□□ -0.5
MED28-203ENST00000503945 FOXP3Q9BZS1 431 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 TRIM5Q9C035 493 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 FAM83DQ9H4H8 585 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.9□□□□□ -0.5
MED28-203ENST00000503945 TAAR2Q9P1P5 351 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 ZNHIT2Q9UHR6 403 aa11.9□□□□□ -0.5
MED28-203ENST00000503945 C1orf232A0A0U1RR37 186 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 CYSRT1A8MQ03 144 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 CDRT15L2A8MXV6 281 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 D6RAR5 112 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 PPP1R12AO14974 1030 aaPredicted RBP11.89□□□□□ -0.51
MED28-203ENST00000503945 B4GAT1O43505 415 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 SPOPO43791 374 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 ECEL1O95672 775 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 ITGA2BP08514 1039 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 JMJD7P0C870 316 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 AK4P27144 223 aaPredicted RBP11.89□□□□□ -0.51
MED28-203ENST00000503945 CCKBRP32239 447 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 NR2C2P49116 596 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 STC1P52823 247 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 IFI35P80217 286 aaPredicted RBP11.89□□□□□ -0.51
MED28-203ENST00000503945 SKOR1P84550 965 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 B4GALNT1Q00973 533 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 ZFP36L1Q07352 338 aaKnown RBP11.89□□□□□ -0.51
MED28-203ENST00000503945 TCEAL1Q15170 157 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 AMZ1Q400G9 498 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 SLC9A4Q6AI14 798 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 USP53Q70EK8 1073 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 KDELC2Q7Z4H8 507 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 NRROSQ86YC3 692 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 RFX6Q8HWS3 928 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 SFTPA2Q8IWL1 248 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 SCARF2Q96GP6 870 aaPredicted RBP11.89□□□□□ -0.51
MED28-203ENST00000503945 AGAP3Q96P47 875 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 SMIM14Q96QK8 99 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 LYSMD1Q96S90 227 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 CMKLR1Q99788 373 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 CDH19Q9H159 772 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 PKD2L2Q9NZM6 624 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 AKAP7Q9P0M2 348 aaPredicted RBP11.89□□□□□ -0.51
MED28-203ENST00000503945 SEPT10Q9P0V9 454 aa11.89□□□□□ -0.51
MED28-203ENST00000503945 ATXN7L1Q9ULK2 861 aaPredicted RBP11.89□□□□□ -0.51
MED28-203ENST00000503945 LRRK1Q38SD2 2015 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 C3orf70A6NLC5 250 aaPredicted RBP11.88□□□□□ -0.51
MED28-203ENST00000503945 B8ZZF3 427 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 PYCARD-AS1I3L0S3 204 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 K7ENP7 123 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 INPP4BO15327 924 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 CPNE6O95741 557 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 COMTP21964 271 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 UGT1A5P35504 534 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 ACTR1BP42025 376 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 GPR3P46089 330 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 SPINT3P49223 89 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 OR1D5P58170 312 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 ACTR1AP61163 376 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 LRP8Q14114 963 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 TFDP2Q14188 446 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 SPA17Q15506 151 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 CLPPQ16740 277 aaPredicted RBP11.88□□□□□ -0.51
MED28-203ENST00000503945 QPCTQ16769 361 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 PYCR3Q53H96 274 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 KIAA1614Q5VZ46 1190 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 INO80CQ6PI98 192 aaPredicted RBP11.88□□□□□ -0.51
MED28-203ENST00000503945 MARK2Q7KZI7 788 aaKnown RBP11.88□□□□□ -0.51
MED28-203ENST00000503945 SPRED1Q7Z699 444 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 B3GNT8Q7Z7M8 397 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 C17orf82Q86X59 251 aaPredicted RBP11.88□□□□□ -0.51
MED28-203ENST00000503945 JAMLQ86YT9 394 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 GALNT13Q8IUC8 556 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 RCOR2Q8IZ40 523 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 CNTD1Q8N815 330 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 AGAP2Q99490 1192 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 SLC25A51Q9H1U9 297 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 ZFYVE1Q9HBF4 777 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 RAD18Q9NS91 495 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 WDR70Q9NW82 654 aa11.88□□□□□ -0.51
MED28-203ENST00000503945 PCDHGA7Q9Y5G6 932 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms