RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 CHST8Q9H2A9 424 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 APOBEC3GQ9HC16 384 aaKnown RBP2.78□□□□□ -1.96
NEDD4-204ENST00000503468 CYP26B1Q9NR63 512 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 FBXO8Q9NRD0 319 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 B3GNT2Q9NY97 397 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 SMARCAL1Q9NZC9 954 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 PKD2L1Q9P0L9 805 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 HCN2Q9UL51 889 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 VANGL2Q9ULK5 521 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 PPM1HQ9ULR3 514 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 STUB1Q9UNE7 303 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 EIF3LQ9Y262 564 aaKnown RBP2.78□□□□□ -1.96
NEDD4-204ENST00000503468 INPP5FQ9Y2H2 1132 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 TLN1Q9Y490 2541 aaKnown RBP2.78□□□□□ -1.96
NEDD4-204ENST00000503468 C1orf232A0A0U1RR37 186 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 PRSS51A0A1B0GVH4 220 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 GOLGA8JA6NMD2 632 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 ACOX3O15254 700 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 MSI1O43347 362 aaKnown RBP2.78□□□□□ -1.96
NEDD4-204ENST00000503468 PEX10O60683 326 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 CRTAMO95727 393 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 ALBP02768 609 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 ENO1P06733 434 aaKnown RBP2.78□□□□□ -1.96
NEDD4-204ENST00000503468 INHBBP09529 407 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF8P17098 575 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-204ENST00000503468 RPS3P23396 243 aaKnown RBP eCLIP2.78□□□□□ -1.96
NEDD4-204ENST00000503468 FASP25445 335 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 IL12RB1P42701 662 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 GZMMP51124 257 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 DSTNP60981 165 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 PRKAA1Q13131 559 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 CAPSQ13938 189 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 KCNJ11Q14654 390 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 MESDQ14696 234 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 SURF1Q15526 300 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 HADHQ16836 314 aaKnown RBP2.78□□□□□ -1.96
NEDD4-204ENST00000503468 FAM47CQ5HY64 1035 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 ANGEL2Q5VTE6 544 aaKnown RBP2.78□□□□□ -1.96
NEDD4-204ENST00000503468 BTBD8Q5XKL5 378 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF438Q7Z4V0 828 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 SPRED1Q7Z699 444 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 STX12Q86Y82 276 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 RCOR2Q8IZ40 523 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 NAT8LQ8N9F0 302 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 OR7A2PQ8NGA2 310 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 TBC1D15Q8TC07 691 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 SH3KBP1Q96B97 665 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 HDAC11Q96DB2 347 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 PDXPQ96GD0 296 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 POM121Q96HA1 1249 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 RADILQ96JH8 1075 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 BARD1Q99728 777 aaKnown RBP2.78□□□□□ -1.96
NEDD4-204ENST00000503468 ACO2Q99798 780 aaKnown RBP2.78□□□□□ -1.96
NEDD4-204ENST00000503468 AGPAT1Q99943 283 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 GDF15Q99988 308 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 ZBED2Q9BTP6 218 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 ACAD9Q9H845 621 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 UCK1Q9HA47 277 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF556Q9HAH1 456 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 GJB4Q9NTQ9 266 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 GGT7Q9UJ14 662 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 PCDHA12Q9UN75 941 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 CLEC11AQ9Y240 323 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 CFL2Q9Y281 166 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 PCDHB4Q9Y5E5 795 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 TEX264Q9Y6I9 313 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 A6NCN8 305 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 TUBAL3A6NHL2 446 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 FAM170BA6NMN3 283 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 NPIPA2E9PIF3 369 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 IFRD1O00458 451 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-204ENST00000503468 AXIN1O15169 862 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 SGTAO43765 313 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 TMCC2O75069 709 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 CCNKO75909 580 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 PDE9AO76083 593 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 PROSCO94903 275 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 MTHFD1P11586 935 aaKnown RBP2.78□□□□□ -1.96
NEDD4-204ENST00000503468 COMTP21964 271 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 GLUD2P49448 558 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 AQP4P55087 323 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 ITGADQ13349 1161 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 TRIM25Q14258 630 aaKnown RBP2.78□□□□□ -1.96
NEDD4-204ENST00000503468 GALNT3Q14435 633 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 DLG2Q15700 870 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 DUSP7Q16829 419 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 MICAQ29983 383 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF284Q2VY69 593 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 CDONQ4KMG0 1287 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 KLHL12Q53G59 568 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 XKR7Q5GH72 579 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 CRB2Q5IJ48 1285 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 DCLRE1AQ6PJP8 1040 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 PLEKHG7Q6ZR37 379 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 ANKMY2Q8IV38 441 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 ARHGAP12Q8IWW6 846 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 DEFB107AQ8IZN7 70 aa2.78□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF564Q8TBZ8 553 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-204ENST00000503468 HDAC2Q92769 488 aaKnown RBP2.78□□□□□ -1.96
NEDD4-204ENST00000503468 ISOC1Q96CN7 298 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms