RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.13■□□□□ 0.49
PDLIM7-209ENST00000503346 CNOT1A5YKK6 2376 aaKnown RBP18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 PRSS38A1L453 326 aa18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 FADS2P1A8MWK0 482 aa18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 LMO7DNF2Z398 122 aa18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 DKK1O94907 266 aa18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 AP2A1O95782 977 aa18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 FTH1P19P0C7X4 201 aa18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 ACTN2P35609 894 aa18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 FDFT1P37268 417 aa18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 C1orf61Q13536 156 aa18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 SPARCL1Q14515 664 aa18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 ELOCQ15369 112 aa18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 HS1BP3Q53T59 392 aa18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 ZDHHC20Q5W0Z9 365 aa18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 PDPK2PQ6A1A2 396 aa18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 RD3Q7Z3Z2 195 aa18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 CCDC89Q8N998 374 aa18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 FAM181AQ8N9Y4 354 aa18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 DTX3LQ8TDB6 740 aa18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 ACTRT1Q8TDG2 376 aa18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 COG1Q8WTW3 980 aa18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 SCARF2Q96GP6 870 aaPredicted RBP18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 MS4A14Q96JA4 679 aa18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 NAP1L3Q99457 506 aaPredicted RBP18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 ZSCAN5AQ9BUG6 496 aa18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 MRPL40Q9NQ50 206 aaKnown RBP18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 KCND1Q9NSA2 647 aa18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 PAK5Q9P286 719 aa18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 COL5A1P20908 1838 aaPredicted RBP18.12■□□□□ 0.49
PDLIM7-209ENST00000503346 ERI2A8K979 691 aaKnown RBP18.11■□□□□ 0.49
PDLIM7-209ENST00000503346 PGRMC1O00264 195 aaKnown RBP18.11■□□□□ 0.49
PDLIM7-209ENST00000503346 INPP4BO15327 924 aa18.11■□□□□ 0.49
PDLIM7-209ENST00000503346 USP12O75317 370 aa18.11■□□□□ 0.49
PDLIM7-209ENST00000503346 PPFIA2O75334 1257 aa18.11■□□□□ 0.49
PDLIM7-209ENST00000503346 IVLP07476 585 aa18.11■□□□□ 0.49
PDLIM7-209ENST00000503346 CTSEP14091 401 aa18.11■□□□□ 0.49
PDLIM7-209ENST00000503346 ETS1P14921 441 aa18.11■□□□□ 0.49
PDLIM7-209ENST00000503346 GNG11P61952 73 aa18.11■□□□□ 0.49
PDLIM7-209ENST00000503346 ALS2CLQ60I27 953 aa18.11■□□□□ 0.49
PDLIM7-209ENST00000503346 SLCO6A1Q86UG4 719 aa18.11■□□□□ 0.49
PDLIM7-209ENST00000503346 PDCD7Q8N8D1 485 aaKnown RBP18.11■□□□□ 0.49
PDLIM7-209ENST00000503346 GLIS1Q8NBF1 620 aa18.11■□□□□ 0.49
PDLIM7-209ENST00000503346 SPATA16Q9BXB7 569 aa18.11■□□□□ 0.49
PDLIM7-209ENST00000503346 ETNK1Q9HBU6 452 aa18.11■□□□□ 0.49
PDLIM7-209ENST00000503346 CYP4F12Q9HCS2 524 aa18.11■□□□□ 0.49
PDLIM7-209ENST00000503346 BPIFA1Q9NP55 256 aa18.11■□□□□ 0.49
PDLIM7-209ENST00000503346 APOBEC2Q9Y235 224 aaKnown RBP18.11■□□□□ 0.49
PDLIM7-209ENST00000503346 PCNX2A6NKB5 2137 aa18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 YY2O15391 372 aa18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 TRIM16O95361 564 aa18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 FUCA1P04066 466 aa18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 ANXA6P08133 673 aa18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 CELA2BP08218 269 aaPredicted RBP18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 CKMT2P17540 419 aa18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 TCP1P17987 556 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 PMLP29590 882 aa18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 RPL22P35268 128 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 KCNJ1P48048 391 aa18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 SEMA5AQ13591 1074 aa18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 TAF1AQ15573 450 aaPredicted RBP18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 DEFB133Q30KQ1 61 aa18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 ZCCHC8Q6NZY4 707 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 LVRNQ6Q4G3 990 aa18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 C4orf22Q6V702 233 aa18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 PRUNE1Q86TP1 453 aa18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 TRIM74Q86UV6 250 aa18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 TAB3Q8N5C8 712 aaPredicted RBP18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 BRSK1Q8TDC3 778 aa18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 CARS2Q9HA77 564 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 IL26Q9NPH9 171 aa18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 VPS18Q9P253 973 aa18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 SUFUQ9UMX1 484 aa18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 PKP3Q9Y446 797 aa18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 PCDHGA1Q9Y5H4 931 aa18.1■□□□□ 0.49
PDLIM7-209ENST00000503346 C2orf81A6NN90 581 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 SUN1O94901 812 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 ZSCAN5DPP0CG00 497 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 CKMT1AP12532 417 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 LPOP22079 712 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 ACP1P24666 158 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 SPAM1P38567 509 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 POLD2P49005 469 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 ACADVLP49748 655 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 CYP1B1Q16678 543 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 C6orf132Q5T0Z8 1188 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 DOK6Q6PKX4 331 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 GSTA5Q7RTV2 222 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 LINC00523Q86TU6 105 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 GKN2Q86XP6 184 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 PTCD2Q8WV60 388 aaKnown RBP18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 ADAMTS14Q8WXS8 1223 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 APOLD1Q96LR9 279 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 C19orf43Q9BQ61 176 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 BOCQ9BWV1 1114 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 AP1M1Q9BXS5 423 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 TMEM168Q9H0V1 697 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 RAB6BQ9NRW1 208 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 TRNAU1APQ9NX07 287 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms