RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 HSD11B1LQ7Z5J1 315 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 ZFAND4Q86XD8 727 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 VSIG1Q86XK7 387 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 NLGN4XQ8N0W4 816 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 ATPAF2Q8N5M1 289 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 NLGN4YQ8NFZ3 816 aaPredicted RBP6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 OR10G6Q8NH81 332 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 DTX3LQ8TDB6 740 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 AP2M1Q96CW1 435 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 RTP4Q96DX8 246 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 IQCDQ96DY2 449 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 PCMTD1Q96MG8 357 aaPredicted RBP6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 CSPG4P5Q96PW8 444 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 OR2M4Q96R27 311 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 NUDT22Q9BRQ3 303 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 HERPUD2Q9BSE4 406 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 TDRD1Q9BXT4 1180 aaKnown RBP6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 RAB33BQ9H082 229 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 NAT10Q9H0A0 1025 aaKnown RBP6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 ABCG8Q9H221 673 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 CARD9Q9H257 536 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 STN1Q9H668 368 aaKnown RBP6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 HAUS4Q9H6D7 363 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 NOD2Q9HC29 1040 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 SEPT11Q9NVA2 429 aaKnown RBP6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 KCNK4Q9NYG8 393 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 TAS2R14Q9NYV8 317 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 CNOT8Q9UFF9 292 aaKnown RBP6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 PCSK1NQ9UHG2 260 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 GTF3C3Q9Y5Q9 886 aa6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 TLN1Q9Y490 2541 aaKnown RBP6.07□□□□□ -1.44
LSM3P4-201ENST00000502948 SPTA1P02549 2419 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 A0A1B0GTH6 734 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 A0A1W2PQJ5 194 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 LILRA5A6NI73 299 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 PRR19A6NJB7 356 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 LRRC53A6NM62 1247 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 ZNF487B1APH4 448 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 ANKRD66B4E2M5 251 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 DDX3XO00571 662 aaKnown RBP eCLIP6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 MATN3O15232 486 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 NUAK1O60285 661 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 RAD1O60671 282 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 KCNJ13O60928 360 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 C9P02748 559 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 FAM87AP0C7U9 286 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 RARAP10276 462 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 F3P13726 295 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 LIFP15018 202 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 AK4P27144 223 aaPredicted RBP6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 IL1R2P27930 398 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 CSF2RBP32927 897 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 GARSP41250 739 aaKnown RBP6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 ACTR1BP42025 376 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 GNPDA1P46926 289 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 CD97P48960 835 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 ARSEP51690 589 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 STC1P52823 247 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 MAZP56270 477 aaKnown RBP6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 POLE2P56282 527 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 DCDC1P59894 354 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 ACTR1AP61163 376 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 SLC25A11Q02978 314 aaKnown RBP6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 HHEXQ03014 270 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 GALNT2Q10471 571 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 SRSF6Q13247 344 aaKnown RBP6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 KCNAB2Q13303 367 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 BIRC2Q13490 618 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 IL11RAQ14626 422 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 CLCA4Q14CN2 919 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 IFI16Q16666 785 aaKnown RBP6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 AMZ1Q400G9 498 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 HENMT1Q5T8I9 393 aaKnown RBP6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 LRRC66Q68CR7 880 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 CYB5D1Q6P9G0 228 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 IYDQ6PHW0 289 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 SLC30A9Q6PML9 568 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 WASH2PQ6VEQ5 465 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 LYSMD3Q7Z3D4 306 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 ZNF571Q7Z3V5 609 aaPredicted RBP6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 GALNT13Q8IUC8 556 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 SFTPA2Q8IWL1 248 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 RBM12BQ8IXT5 1001 aaKnown RBP6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 CACNA2D3Q8IZS8 1091 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 ESX1Q8N693 406 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 AOPEPQ8N6M6 819 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 IL22RA1Q8N6P7 574 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 SLC37A2Q8TED4 501 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 SEC14L1Q92503 715 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 FAF2Q96CS3 445 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 FCRL4Q96PJ5 515 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 SRPK1Q96SB4 655 aaKnown RBP6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 SLC38A3Q99624 504 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 ZNF670Q9BS34 389 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 WASH6PQ9NQA3 447 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 RAD18Q9NS91 495 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 GPATCH2LQ9NWQ4 482 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 SLC39A1Q9NY26 324 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 SEMA5BQ9P283 1151 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 IP6K2Q9UHH9 426 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms