RNA–Protein interactions for RNA: ENST00000502875.1

TNRC18P1-201, Transcript of trinucleotide repeat containing 18 pseudogene 1, humanhuman

BASIC

Gene TNRC18P1, Length 3,650 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18P1-201ENST00000502875 TCAF2A6NFQ2 919 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 IQCF5A8MTL0 148 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 SEC22BO75396 215 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 CKMP06732 381 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 NDST2P52849 883 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 USP46P62068 366 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 GNA12Q03113 381 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 GRB7Q14451 532 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 PRSS55Q6UWB4 352 aaPredicted RBP13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 FAM151BQ6UXP7 276 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 CLHC1Q8NHS4 586 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 KATNBL1Q9H079 304 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 ACTR8Q9H981 624 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 DNMT3LQ9UJW3 386 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 PRORSD1PA6NEY8 169 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 PTGES3LE9PB15 166 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 SLC22A3O75751 556 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 PKMP14618 531 aaKnown RBP13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 HERVK_113P63132 956 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 ADRM1Q16186 407 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 RABL3Q5HYI8 236 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 MSANTD2Q6P1R3 559 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 LSMEM2Q8N112 164 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 NKAPQ8N5F7 415 aaKnown RBP13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 BRSK1Q8TDC3 778 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 ASB2Q96Q27 587 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 C9orf16Q9BUW7 83 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 ERVK-6Q9BXR3 956 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 PCDHB8Q9UN66 801 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 RAI2Q9Y5P3 530 aa13.54□□□□□ -0.24
TNRC18P1-201ENST00000502875 FKBP9O95302 570 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 CNPP09543 421 aaKnown RBP13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 AGTR2P50052 363 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 LIPEQ05469 1076 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 CRHR2Q13324 411 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 UGT3A1Q6NUS8 523 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 PRMT9Q6P2P2 845 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 ATG14Q6ZNE5 492 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 FKBP9P1Q75LS8 142 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 KLHL32Q96NJ5 620 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 SMIM14Q96QK8 99 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 DPY30Q9C005 99 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 ASB8Q9H765 288 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 POLR1BQ9H9Y6 1135 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 PPP1R8Q12972 351 aaKnown RBP13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 PRKG2Q13237 762 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 LPIN1Q14693 890 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 PGS1Q32NB8 556 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 AARS2Q5JTZ9 985 aaKnown RBP13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 TPGS1Q6ZTW0 290 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 CLEC14AQ86T13 490 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 TMEM74Q96NL1 305 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 TRIM54Q9BYV2 358 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 MFSD1Q9H3U5 465 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 POLG2Q9UHN1 485 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 EIF3LQ9Y262 564 aaKnown RBP13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 COL11A1P12107 1806 aaPredicted RBP13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 S1PR4O95977 384 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 HIST1H2AGP0C0S8 130 aaPredicted RBP13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 FAM163BP0C2L3 166 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 IDO1P14902 403 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 HIST1H2ADP20671 130 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 RPL38P63173 70 aaKnown RBP13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 RHDQ02161 417 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 IL10RBQ08334 325 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 LCP2Q13094 533 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 SEMA3BQ13214 749 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 HERC3Q15034 1050 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 PARP15Q460N3 678 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 CMPK2Q5EBM0 449 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 HECTD3Q5T447 861 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 ARMC3Q5W041 872 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 AFTPHQ6ULP2 937 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 CPSF7Q8N684 471 aaKnown RBP13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 ITFG1Q8TB96 612 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 PGAP3Q96FM1 320 aaPredicted RBP13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 IMP4Q96G21 291 aaKnown RBP13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 HIST1H2AHQ96KK5 128 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 HIST1H2AJQ99878 128 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 H2AFJQ9BTM1 129 aa13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 PAIP1Q9H074 479 aaKnown RBP13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 CNOT6Q9ULM6 557 aaKnown RBP13.53□□□□□ -0.24
TNRC18P1-201ENST00000502875 A0A087WXM4 84 aa13.52□□□□□ -0.24
TNRC18P1-201ENST00000502875 ZNF195O14628 629 aa13.52□□□□□ -0.24
TNRC18P1-201ENST00000502875 GPR107Q5VW38 600 aa13.52□□□□□ -0.24
TNRC18P1-201ENST00000502875 GFM2Q969S9 779 aaKnown RBP13.52□□□□□ -0.24
TNRC18P1-201ENST00000502875 BDH2Q9BUT1 245 aa13.52□□□□□ -0.24
TNRC18P1-201ENST00000502875 ARHGAP39Q9C0H5 1083 aa13.52□□□□□ -0.24
TNRC18P1-201ENST00000502875 RUBCNLQ9H714 662 aa13.52□□□□□ -0.24
TNRC18P1-201ENST00000502875 PNPLA3Q9NST1 481 aa13.52□□□□□ -0.24
TNRC18P1-201ENST00000502875 LEF1Q9UJU2 399 aaPredicted RBP13.52□□□□□ -0.24
TNRC18P1-201ENST00000502875 TTC3P53804 2025 aa13.52□□□□□ -0.24
TNRC18P1-201ENST00000502875 YBEYP58557 167 aaPredicted RBP13.52□□□□□ -0.25
TNRC18P1-201ENST00000502875 FKBP1BP68106 108 aa13.52□□□□□ -0.25
TNRC18P1-201ENST00000502875 TRIP4Q15650 581 aaPredicted RBP13.52□□□□□ -0.25
TNRC18P1-201ENST00000502875 CPSF6Q16630 551 aaKnown RBP eCLIP13.52□□□□□ -0.25
TNRC18P1-201ENST00000502875 ZNF678Q5SXM1 525 aa13.52□□□□□ -0.25
TNRC18P1-201ENST00000502875 SMYD5Q6GMV2 418 aa13.52□□□□□ -0.25
TNRC18P1-201ENST00000502875 FBXL19Q6PCT2 694 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms