RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 PIP4P1Q86T03 277 aa24.97■■□□□ 1.59
LSM6-202ENST00000502781 OR56A4Q8NGH8 313 aa24.97■■□□□ 1.59
LSM6-202ENST00000502781 RUNDC3BQ96NL0 473 aa24.97■■□□□ 1.59
LSM6-202ENST00000502781 RTKNQ9BST9 563 aa24.97■■□□□ 1.59
LSM6-202ENST00000502781 FGF22Q9HCT0 170 aa24.97■■□□□ 1.59
LSM6-202ENST00000502781 PKP3Q9Y446 797 aa24.97■■□□□ 1.59
LSM6-202ENST00000502781 KCTD3Q9Y597 815 aa24.97■■□□□ 1.59
LSM6-202ENST00000502781 DGKBQ9Y6T7 804 aa24.97■■□□□ 1.59
LSM6-202ENST00000502781 SCN8AQ9UQD0 1980 aa24.96■■□□□ 1.59
LSM6-202ENST00000502781 STX7O15400 261 aaKnown RBP24.96■■□□□ 1.59
LSM6-202ENST00000502781 PIAS2O75928 621 aa24.96■■□□□ 1.59
LSM6-202ENST00000502781 PSMA3P25788 255 aa24.96■■□□□ 1.59
LSM6-202ENST00000502781 VPS41P49754 854 aa24.96■■□□□ 1.59
LSM6-202ENST00000502781 ZNF140P52738 457 aaPredicted RBP24.96■■□□□ 1.59
LSM6-202ENST00000502781 HNRNPKP61978 463 aaKnown RBP eCLIP24.96■■□□□ 1.59
LSM6-202ENST00000502781 IL9RQ01113 521 aa24.96■■□□□ 1.59
LSM6-202ENST00000502781 ALG11Q2TAA5 492 aa24.96■■□□□ 1.59
LSM6-202ENST00000502781 ALS2CLQ60I27 953 aa24.96■■□□□ 1.59
LSM6-202ENST00000502781 KCTD16Q68DU8 428 aa24.96■■□□□ 1.59
LSM6-202ENST00000502781 ENPP7Q6UWV6 458 aa24.96■■□□□ 1.59
LSM6-202ENST00000502781 HIC2Q96JB3 615 aa24.96■■□□□ 1.59
LSM6-202ENST00000502781 TBATAQ96M53 351 aa24.96■■□□□ 1.59
LSM6-202ENST00000502781 FRMD8Q9BZ67 464 aaPredicted RBP24.96■■□□□ 1.59
LSM6-202ENST00000502781 PIH1D1Q9NWS0 290 aaKnown RBP24.96■■□□□ 1.59
LSM6-202ENST00000502781 TCRBV7S3A2A0A539 114 aa24.95■■□□□ 1.59
LSM6-202ENST00000502781 KIF2AO00139 706 aaPredicted RBP24.95■■□□□ 1.59
LSM6-202ENST00000502781 GAPDHSO14556 408 aaPredicted RBP24.95■■□□□ 1.59
LSM6-202ENST00000502781 JUNDP17535 347 aa24.95■■□□□ 1.59
LSM6-202ENST00000502781 HK3P52790 923 aa24.95■■□□□ 1.59
LSM6-202ENST00000502781 PPARDQ03181 441 aa24.95■■□□□ 1.59
LSM6-202ENST00000502781 PTK6Q13882 451 aa24.95■■□□□ 1.59
LSM6-202ENST00000502781 PTPRCAPQ14761 206 aa24.95■■□□□ 1.59
LSM6-202ENST00000502781 SUZ12Q15022 739 aaKnown RBP24.95■■□□□ 1.59
LSM6-202ENST00000502781 PPP1R21Q6ZMI0 780 aa24.95■■□□□ 1.59
LSM6-202ENST00000502781 PHACTR4Q8IZ21 702 aa24.95■■□□□ 1.59
LSM6-202ENST00000502781 DNAAF3Q8N9W5 541 aa24.95■■□□□ 1.59
LSM6-202ENST00000502781 OR4K2Q8NGD2 314 aa24.95■■□□□ 1.59
LSM6-202ENST00000502781 OR1E3Q8WZA6 343 aa24.95■■□□□ 1.59
LSM6-202ENST00000502781 CPT1BQ92523 772 aa24.95■■□□□ 1.59
LSM6-202ENST00000502781 PDXPQ96GD0 296 aa24.95■■□□□ 1.59
LSM6-202ENST00000502781 SPATA16Q9BXB7 569 aa24.95■■□□□ 1.59
LSM6-202ENST00000502781 KLQ9UEF7 1012 aa24.95■■□□□ 1.59
LSM6-202ENST00000502781 SLC17A4Q9Y2C5 497 aa24.95■■□□□ 1.59
LSM6-202ENST00000502781 SPTBN4Q9H254 2564 aa24.95■■□□□ 1.58
LSM6-202ENST00000502781 CNOT1A5YKK6 2376 aaKnown RBP24.94■■□□□ 1.58
LSM6-202ENST00000502781 FLRT2O43155 660 aa24.94■■□□□ 1.58
LSM6-202ENST00000502781 CEACAM5P06731 702 aa24.94■■□□□ 1.58
LSM6-202ENST00000502781 DGKAP23743 735 aa24.94■■□□□ 1.58
LSM6-202ENST00000502781 SPAM1P38567 509 aa24.94■■□□□ 1.58
LSM6-202ENST00000502781 SRP54P61011 504 aaKnown RBP24.94■■□□□ 1.58
LSM6-202ENST00000502781 POU6F1Q14863 301 aa24.94■■□□□ 1.58
LSM6-202ENST00000502781 CERCAMQ5T4B2 595 aa24.94■■□□□ 1.58
LSM6-202ENST00000502781 ZNF534Q76KX8 674 aa24.94■■□□□ 1.58
LSM6-202ENST00000502781 GATAD2AQ86YP4 633 aa24.94■■□□□ 1.58
LSM6-202ENST00000502781 KLHL7Q8IXQ5 586 aa24.94■■□□□ 1.58
LSM6-202ENST00000502781 SLC25A45Q8N413 288 aa24.94■■□□□ 1.58
LSM6-202ENST00000502781 SPATA4Q8NEY3 305 aa24.94■■□□□ 1.58
LSM6-202ENST00000502781 BTN2A2Q8WVV5 523 aa24.94■■□□□ 1.58
LSM6-202ENST00000502781 TSACCQ96A04 125 aaPredicted RBP24.94■■□□□ 1.58
LSM6-202ENST00000502781 SCARF2Q96GP6 870 aaPredicted RBP24.94■■□□□ 1.58
LSM6-202ENST00000502781 TCEAL2Q9H3H9 227 aaPredicted RBP24.94■■□□□ 1.58
LSM6-202ENST00000502781 MROH6A6NGR9 719 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 H3BM21 787 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 SDC3O75056 442 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 RASGRP1O95267 797 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 FUCA1P04066 466 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 CSRP1P21291 193 aaKnown RBP24.93■■□□□ 1.58
LSM6-202ENST00000502781 BLKP51451 505 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 PPP1R7Q15435 360 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 SYDE1Q6ZW31 735 aaPredicted RBP24.93■■□□□ 1.58
LSM6-202ENST00000502781 ZNF572Q7Z3I7 529 aaPredicted RBP24.93■■□□□ 1.58
LSM6-202ENST00000502781 RBFAQ8N0V3 343 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 OR13C4Q8NGS5 318 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 VPS35Q96QK1 796 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 RANBP9Q96S59 729 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 CDC23Q9UJX2 597 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 TMPRSS11EQ9UL52 423 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 ARID1BQ8NFD5 2236 aaPredicted RBP24.93■■□□□ 1.58
LSM6-202ENST00000502781 GLYATL1P3A0A0U1RQE8 302 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 PRSS38A1L453 326 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 INPP4BO15327 924 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 SH3BP5O60239 455 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 CBFA2T3O75081 653 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 GIMD1P0DJR0 217 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 IVDP26440 423 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 XIAPP98170 497 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 ATP13A5Q4VNC0 1218 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 ANKRD22Q5VYY1 191 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 LRRC8BQ6P9F7 803 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 NAXDQ8IW45 347 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 ZNF548Q8NEK5 533 aaPredicted RBP24.93■■□□□ 1.58
LSM6-202ENST00000502781 GLYATL1Q969I3 302 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 LRRC61Q9BV99 259 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 UCKL1Q9NWZ5 548 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 VPS18Q9P253 973 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 APOBEC3BQ9UH17 382 aaKnown RBP24.93■■□□□ 1.58
LSM6-202ENST00000502781 RIMKLBQ9ULI2 386 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 BTBD3Q9Y2F9 522 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 CSNK1G3Q9Y6M4 447 aa24.93■■□□□ 1.58
LSM6-202ENST00000502781 AP3B1O00203 1094 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms