RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 SEC61A2Q9H9S3 476 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 C17orf75Q9HAS0 396 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 SETD4Q9NVD3 440 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 ATAD3AQ9NVI7 634 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 CRNNQ9UBG3 495 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 CLIP2Q9UDT6 1046 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 CCNL1Q9UK58 526 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 CFAP45Q9UL16 551 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 SORCS3Q9UPU3 1222 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 STRAPQ9Y3F4 350 aaKnown RBP4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 SNX14Q9Y5W7 946 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 ZNF536O15090 1300 aa4.37□□□□□ -1.71
HMGB1P21-201ENST00000502313 ARPC4-TTLL3A0A0A6YYG9 625 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 A0A0G2JPF8 293 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 HTR3EA5X5Y0 456 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 NPIPB13A6NJU9 1138 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 SLC9B1P1A6NJY1 282 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 LRRC53A6NM62 1247 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 ANXA2P2A6NMY6 339 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 NPIPB5A8MRT5 1133 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 KDM4EB2RXH2 506 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 HNRNPCL3B7ZW38 293 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 NPIPB4C9JG80 1138 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 CEP104O60308 925 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 TRIM13O60858 407 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 MITFO75030 526 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 ERN1O75460 977 aaKnown RBP4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 STC2O76061 302 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 WDR47O94967 919 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 KCNK5O95279 499 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 CELF2O95319 508 aaKnown RBP4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 SIX3O95343 332 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 IPO7O95373 1038 aaKnown RBP4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 TSPAN15O95858 294 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 PDGFBP01127 241 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 TGFAP01135 160 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 C1QTNF9P0C862 333 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 HNRNPCL4P0DMR1 293 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 CYP19A1P11511 503 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 HMGB2P26583 209 aaKnown RBP4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 PON1P27169 355 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 PRKAR1BP31321 381 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 PRKAR2BP31323 418 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 FMO4P31512 558 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 CTNNB1P35222 781 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 TMPOP42166 694 aaKnown RBP4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 ASMTP46597 345 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 MTNR1AP48039 350 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 GNAQP50148 359 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 GBX2P52951 348 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 PMP22Q01453 160 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 TAP1Q03518 808 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 KIF5AQ12840 1032 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 SEMA3BQ13214 749 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 BYSLQ13895 437 aaKnown RBP4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 GRM7Q14831 915 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 KARSQ15046 597 aaKnown RBP4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 SLC18A3Q16572 532 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 VMACQ2NL98 169 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 HS1BP3Q53T59 392 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 CAVIN4Q5BKX8 364 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 STXBP5Q5T5C0 1151 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 NT5DC1Q5TFE4 455 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 FAM90A2PQ658T7 463 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 TPGS2Q68CL5 300 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 SLC9A4Q6AI14 798 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 SMIM5Q71RC9 77 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 PRRT2Q7Z6L0 340 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 GSPT2Q8IYD1 628 aaKnown RBP4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 ELMOD2Q8IZ81 293 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 D2HGDHQ8N465 521 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 LPCAT1Q8NF37 534 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 OR6C4Q8NGE1 309 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 OR56B2PQ8NGI1 322 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 PTPMT1Q8WUK0 201 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 ST8SIA2Q92186 375 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 MBD6Q96DN6 1003 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 BORCS6Q96GS4 357 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 ZNF830Q96NB3 372 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 OR2A14Q96R47 310 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 CDRT15Q96T59 188 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 HNRNPABQ99729 332 aaKnown RBP4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 NUAK2Q9H093 628 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 NCOR1P1Q9H4R4 102 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 DENND2DQ9H6A0 471 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 TMEM206Q9H813 350 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 SYTL2Q9HCH5 934 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 TMOD3Q9NYL9 352 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 VSX1Q9NZR4 365 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 C6orf203Q9P0P8 240 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 RIMKLBQ9ULI2 386 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 NDRG4Q9ULP0 352 aaKnown RBP4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 STX8Q9UNK0 236 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 ASB3Q9Y575 518 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 RAD54BQ9Y620 910 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 SQORQ9Y6N5 450 aa4.36□□□□□ -1.71
HMGB1P21-201ENST00000502313 NRXN2Q9P2S2 1712 aa4.35□□□□□ -1.71
HMGB1P21-201ENST00000502313 KIF13BQ9NQT8 1826 aa4.35□□□□□ -1.71
HMGB1P21-201ENST00000502313 LOC100509620A0A075B734 347 aa4.35□□□□□ -1.71
HMGB1P21-201ENST00000502313 EDDM13A0A1B0GTR0 161 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms