RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 HENMT1Q5T8I9 393 aaKnown RBP12.73□□□□□ -0.37
HSPG2-213ENST00000498495 ALS2CLQ60I27 953 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 KCTD16Q68DU8 428 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 DOK6Q6PKX4 331 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 ARHGEF18Q6ZSZ5 1173 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 TMPRSS12Q86WS5 348 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 GPR26Q8NDV2 337 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 FAM46DQ8NEK8 389 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 SLC35B2Q8TB61 432 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 BLOC1S5Q8TDH9 187 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 WDR24Q96S15 920 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 TMEM121Q9BTD3 319 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 FICDQ9BVA6 458 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 BOCQ9BWV1 1114 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 SPATA16Q9BXB7 569 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 FRMD8P1Q9BZ68 369 aaPredicted RBP12.73□□□□□ -0.37
HSPG2-213ENST00000498495 ABCG4Q9H172 646 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 SUFUQ9UMX1 484 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 SLC17A4Q9Y2C5 497 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 GPSM3Q9Y4H4 160 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 SPO11Q9Y5K1 396 aa12.73□□□□□ -0.37
HSPG2-213ENST00000498495 ZSCAN12O43309 604 aa12.72□□□□□ -0.37
HSPG2-213ENST00000498495 FUCA1P04066 466 aa12.72□□□□□ -0.37
HSPG2-213ENST00000498495 IVLP07476 585 aa12.72□□□□□ -0.37
HSPG2-213ENST00000498495 HMGCLP35914 325 aa12.72□□□□□ -0.37
HSPG2-213ENST00000498495 SMAD1Q15797 465 aaKnown RBP12.72□□□□□ -0.37
HSPG2-213ENST00000498495 RANBP10Q6VN20 620 aa12.72□□□□□ -0.37
HSPG2-213ENST00000498495 TRIM74Q86UV6 250 aa12.72□□□□□ -0.37
HSPG2-213ENST00000498495 TRAM1L1Q8N609 369 aa12.72□□□□□ -0.37
HSPG2-213ENST00000498495 C1orf54Q8WWF1 131 aa12.72□□□□□ -0.37
HSPG2-213ENST00000498495 COX14Q96I36 57 aa12.72□□□□□ -0.37
HSPG2-213ENST00000498495 CNTNAP3BQ96NU0 1288 aa12.72□□□□□ -0.37
HSPG2-213ENST00000498495 ZSCAN5AQ9BUG6 496 aa12.72□□□□□ -0.37
HSPG2-213ENST00000498495 TLR10Q9BXR5 811 aa12.72□□□□□ -0.37
HSPG2-213ENST00000498495 GSDMCQ9BYG8 508 aa12.72□□□□□ -0.37
HSPG2-213ENST00000498495 CNTNAP3Q9BZ76 1288 aa12.72□□□□□ -0.37
HSPG2-213ENST00000498495 DPEP2Q9H4A9 486 aa12.72□□□□□ -0.37
HSPG2-213ENST00000498495 BPIFA1Q9NP55 256 aa12.72□□□□□ -0.37
HSPG2-213ENST00000498495 TRNAU1APQ9NX07 287 aaKnown RBP12.72□□□□□ -0.37
HSPG2-213ENST00000498495 SIRPGQ9P1W8 387 aa12.72□□□□□ -0.37
HSPG2-213ENST00000498495 PADI4Q9UM07 663 aa12.72□□□□□ -0.37
HSPG2-213ENST00000498495 GPR34Q9UPC5 381 aa12.72□□□□□ -0.37
HSPG2-213ENST00000498495 ZNF148Q9UQR1 794 aa12.72□□□□□ -0.37
HSPG2-213ENST00000498495 LY6G6EA0A0G2JKS1 128 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 EME2A4GXA9 379 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-213ENST00000498495 FAM149AA5PLN7 773 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 FADS2P1A8MWK0 482 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 PSMD3O43242 534 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 LIASO43766 372 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 SLC25A14O95258 325 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-213ENST00000498495 ATP1A1P05023 1023 aaKnown RBP12.71□□□□□ -0.37
HSPG2-213ENST00000498495 GP1BAP07359 652 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 BPIP17213 487 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 ACTN2P35609 894 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 GDF10P55107 478 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 DCDC1P59894 354 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 ILF3Q12906 894 aaKnown RBP eCLIP12.71□□□□□ -0.37
HSPG2-213ENST00000498495 SNX1Q13596 522 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 PEX6Q13608 980 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 ZDHHC20Q5W0Z9 365 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 CCNI2Q6ZMN8 369 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-213ENST00000498495 MARK2Q7KZI7 788 aaKnown RBP12.71□□□□□ -0.37
HSPG2-213ENST00000498495 EFL1Q7Z2Z2 1120 aaKnown RBP12.71□□□□□ -0.37
HSPG2-213ENST00000498495 GLT6D1Q7Z4J2 308 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 SLC35F3Q8IY50 421 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 ARL10Q8N8L6 244 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 CCL4L1Q8NHW4 92 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 IFI44Q8TCB0 444 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 GPBAR1Q8TDU6 330 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 PTCD2Q8WV60 388 aaKnown RBP12.71□□□□□ -0.37
HSPG2-213ENST00000498495 MAIP1Q8WWC4 291 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 ATG4AQ8WYN0 398 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 APOL2Q9BQE5 337 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 GORASP1Q9BQQ3 440 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.71□□□□□ -0.37
HSPG2-213ENST00000498495 ZNHIT2Q9UHR6 403 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 CNOT6Q9ULM6 557 aaKnown RBP12.71□□□□□ -0.37
HSPG2-213ENST00000498495 PKP3Q9Y446 797 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 U3KQA8 63 aa12.71□□□□□ -0.37
HSPG2-213ENST00000498495 ARID1BQ8NFD5 2236 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-213ENST00000498495 CACNA1AO00555 2505 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 SPTBN2O15020 2390 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 C2orf81A6NN90 581 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 STX7O15400 261 aaKnown RBP12.7□□□□□ -0.38
HSPG2-213ENST00000498495 CEP104O60308 925 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 METTL18O95568 372 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 IFNB1P01574 187 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 CXCR5P32302 372 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 ADRA1AP35348 466 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 ADCY8P40145 1251 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 INSM1Q01101 510 aaPredicted RBP12.7□□□□□ -0.38
HSPG2-213ENST00000498495 OLIG2Q13516 323 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 SPARCL1Q14515 664 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 CCNG2Q16589 344 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 LONRF2Q1L5Z9 754 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 P3H1Q32P28 736 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 PYCR3Q53H96 274 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 ZNF569Q5MCW4 686 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 HES3Q5TGS1 186 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 PDPK2PQ6A1A2 396 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms