RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 RAD51Q06609 339 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 ELP6Q0PNE2 266 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 TOB2Q14106 344 aaPredicted RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 CLCA4Q14CN2 919 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 TMEM177Q53S58 311 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 CDKL4Q5MAI5 379 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 C10orf120Q5SQS8 335 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 MARCH8Q5T0T0 291 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 FAM171A1Q5VUB5 890 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 DPY19L2P1Q6NXN4 242 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 LAYNQ6UX15 382 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 RTL4Q6ZR62 310 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 UBE2R2Q712K3 238 aaPredicted RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 TAS2R42Q7RTR8 314 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 ADGRG6Q86SQ4 1221 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 PRUNE1Q86TP1 453 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 IQCKQ8N0W5 287 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 CELF5Q8N6W0 485 aaKnown RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 MLKLQ8NB16 471 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 CLRN3Q8NCR9 226 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 BBS1Q8NFJ9 593 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 ADAMTS17Q8TE56 1095 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 ADAMTS15Q8TE58 950 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 AGAP11Q8TF27 550 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 MYDGFQ969H8 173 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 RHBDF1Q96CC6 855 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 NMD3Q96D46 503 aaKnown RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 C18orf8Q96DM3 657 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 OMA1Q96E52 524 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF764Q96H86 408 aaPredicted RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 TMEM41AQ96HV5 264 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 ZFYVE19Q96K21 471 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 PHACTR3Q96KR7 559 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 CCDC17Q96LX7 622 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 MAGEB10Q96LZ2 347 aaPredicted RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 KRTAP4-11Q9BYQ6 195 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 BCL2L14Q9BZR8 327 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 QRSL1Q9H0R6 528 aaKnown RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 RIBC2Q9H4K1 309 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 PCDH9Q9HC56 1237 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 MOV10Q9HCE1 1003 aaKnown RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 MRPL47Q9HD33 250 aaKnown RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 ZC4H2Q9NQZ6 224 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 ETNK2Q9NVF9 386 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 RAB20Q9NX57 234 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 SELENONQ9NZV5 590 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 NTMQ9P121 344 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 DLGAP2Q9P1A6 1054 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 NYAP2Q9P242 653 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 TXNDC16Q9P2K2 825 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 WBP11Q9Y2W2 641 aaKnown RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 SNX14Q9Y5W7 946 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 MAD1L1Q9Y6D9 718 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 ANKRD30BQ9BXX2 1392 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 A0A1W2PRG0 241 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 MTMR11A4FU01 709 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 MAGEA13PA6NCF6 341 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 CFAP73A6NFT4 308 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 HRKO00198 91 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 CXCL11O14625 94 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF197O14709 1029 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 SLC22A1O15245 554 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 PPM1DO15297 605 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 TRIM3O75382 744 aaPredicted RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 ULK1O75385 1050 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 FAM228BP0C875 321 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 CSH1P0DML2 217 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 CSH2P0DML3 217 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 GAAP10253 952 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 SLC2A3P11169 496 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 JUPP14923 745 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 ACADSP16219 412 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 IFNAR1P17181 557 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 CYP2B6P20813 491 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 ATP6V1C1P21283 382 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 FGFR2P21802 821 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 CPN2P22792 545 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 PCSK1P29120 753 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 PCK1P35558 622 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 CAPZA2P47755 286 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 CCT3P49368 545 aaKnown RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 NT5C2P49902 561 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 SERPINB9P50453 376 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 PSMD4P55036 377 aaKnown RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 ELF3P78545 371 aaPredicted RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 MAT1AQ00266 395 aaKnown RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 RPA4Q13156 261 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 STX3Q13277 289 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 NAB1Q13506 487 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 ITGA9Q13797 1035 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 KRT31Q15323 416 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 TESK1Q15569 626 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 TBR1Q16650 682 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 GTDC1Q4AE62 458 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 GPAT3Q53EU6 434 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 FBXO47Q5MNV8 452 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 FAM26FQ5R3K3 315 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 PRR31Q5SQ13 230 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms