RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 MC4RP32245 332 aa18.25■□□□□ 0.51
TSSC4-210ENST00000496468 HOXD12P35452 270 aa18.25■□□□□ 0.51
TSSC4-210ENST00000496468 ELK3P41970 407 aa18.25■□□□□ 0.51
TSSC4-210ENST00000496468 ARSDP51689 593 aa18.25■□□□□ 0.51
TSSC4-210ENST00000496468 ITGA9Q13797 1035 aa18.25■□□□□ 0.51
TSSC4-210ENST00000496468 FASTKD3Q14CZ7 662 aaKnown RBP18.25■□□□□ 0.51
TSSC4-210ENST00000496468 HP1BP3Q5SSJ5 553 aaPredicted RBP18.25■□□□□ 0.51
TSSC4-210ENST00000496468 PDPK2PQ6A1A2 396 aa18.25■□□□□ 0.51
TSSC4-210ENST00000496468 LAIR1Q6GTX8 287 aa18.25■□□□□ 0.51
TSSC4-210ENST00000496468 PNCKQ6P2M8 343 aa18.25■□□□□ 0.51
TSSC4-210ENST00000496468 CES3Q6UWW8 571 aa18.25■□□□□ 0.51
TSSC4-210ENST00000496468 ABI3BPQ7Z7G0 1075 aa18.25■□□□□ 0.51
TSSC4-210ENST00000496468 CCNJLQ8IV13 435 aa18.25■□□□□ 0.51
TSSC4-210ENST00000496468 ANKMY2Q8IV38 441 aa18.25■□□□□ 0.51
TSSC4-210ENST00000496468 PELI3Q8N2H9 469 aa18.25■□□□□ 0.51
TSSC4-210ENST00000496468 FBXO36Q8NEA4 188 aa18.25■□□□□ 0.51
TSSC4-210ENST00000496468 PIGKQ92643 395 aa18.25■□□□□ 0.51
TSSC4-210ENST00000496468 MFSD3Q96ES6 412 aa18.25■□□□□ 0.51
TSSC4-210ENST00000496468 CFAP36Q96G28 342 aa18.25■□□□□ 0.51
TSSC4-210ENST00000496468 LOXL4Q96JB6 756 aa18.25■□□□□ 0.51
TSSC4-210ENST00000496468 TRIM56Q9BRZ2 755 aaKnown RBP18.25■□□□□ 0.51
TSSC4-210ENST00000496468 ZC3H7BQ9UGR2 993 aaKnown RBP18.25■□□□□ 0.51
TSSC4-210ENST00000496468 PILRBQ9UKJ0 227 aa18.25■□□□□ 0.51
TSSC4-210ENST00000496468 NFU1Q9UMS0 254 aa18.25■□□□□ 0.51
TSSC4-210ENST00000496468 TEX264Q9Y6I9 313 aa18.25■□□□□ 0.51
TSSC4-210ENST00000496468 USP34Q70CQ2 3546 aa18.24■□□□□ 0.51
TSSC4-210ENST00000496468 POM121BA6NF01 834 aa18.24■□□□□ 0.51
TSSC4-210ENST00000496468 GAPDHSO14556 408 aaPredicted RBP18.24■□□□□ 0.51
TSSC4-210ENST00000496468 SRP72O76094 671 aaKnown RBP18.24■□□□□ 0.51
TSSC4-210ENST00000496468 TTC4O95801 387 aa18.24■□□□□ 0.51
TSSC4-210ENST00000496468 POLBP06746 335 aa18.24■□□□□ 0.51
TSSC4-210ENST00000496468 TEAD1P28347 426 aa18.24■□□□□ 0.51
TSSC4-210ENST00000496468 TNFRSF8P28908 595 aa18.24■□□□□ 0.51
TSSC4-210ENST00000496468 RABIFP47224 123 aa18.24■□□□□ 0.51
TSSC4-210ENST00000496468 AFF3P51826 1226 aaKnown RBP18.24■□□□□ 0.51
TSSC4-210ENST00000496468 INPP5AQ14642 412 aa18.24■□□□□ 0.51
TSSC4-210ENST00000496468 CRYMQ14894 314 aa18.24■□□□□ 0.51
TSSC4-210ENST00000496468 CHRNA6Q15825 494 aa18.24■□□□□ 0.51
TSSC4-210ENST00000496468 ANKRD20A4Q4UJ75 823 aa18.24■□□□□ 0.51
TSSC4-210ENST00000496468 PEAR1Q5VY43 1037 aaPredicted RBP18.24■□□□□ 0.51
TSSC4-210ENST00000496468 KIAA0930Q6ICG6 404 aaPredicted RBP18.24■□□□□ 0.51
TSSC4-210ENST00000496468 ADAMTSL4Q6UY14 1074 aa18.24■□□□□ 0.51
TSSC4-210ENST00000496468 KDM7AQ6ZMT4 941 aa18.24■□□□□ 0.51
TSSC4-210ENST00000496468 RABEPKQ7Z6M1 372 aa18.24■□□□□ 0.51
TSSC4-210ENST00000496468 NLRP8Q86W28 1048 aa18.24■□□□□ 0.51
TSSC4-210ENST00000496468 HEATR4Q86WZ0 1026 aa18.24■□□□□ 0.51
TSSC4-210ENST00000496468 SYT12Q8IV01 421 aa18.24■□□□□ 0.51
TSSC4-210ENST00000496468 GSPT2Q8IYD1 628 aaKnown RBP18.24■□□□□ 0.51
TSSC4-210ENST00000496468 GPR161Q8N6U8 529 aaKnown RBP18.24■□□□□ 0.51
TSSC4-210ENST00000496468 C1orf216Q8TAB5 229 aa18.24■□□□□ 0.51
TSSC4-210ENST00000496468 FAM174AQ8TBP5 190 aa18.24■□□□□ 0.51
TSSC4-210ENST00000496468 AGAP2Q99490 1192 aa18.24■□□□□ 0.51
TSSC4-210ENST00000496468 TSPYL1Q9H0U9 437 aa18.24■□□□□ 0.51
TSSC4-210ENST00000496468 OR1A2Q9Y585 309 aa18.24■□□□□ 0.51
TSSC4-210ENST00000496468 HS3ST3A1Q9Y663 406 aa18.24■□□□□ 0.51
TSSC4-210ENST00000496468 SLC30A1Q9Y6M5 507 aa18.24■□□□□ 0.51
TSSC4-210ENST00000496468 A0A1B0GTW7 788 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 CCDC162PA2VCL2 907 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 FADS2P1A8MWK0 482 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 PRR5-ARHGAP8B1AHC4 643 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 TOR1BO14657 336 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 GPR39O43194 453 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 CD38P28907 300 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 NBL1P41271 181 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 XIAPP98170 497 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 CBLBQ13191 982 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 NFATC2Q13469 925 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 PEX6Q13608 980 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 TEAD4Q15561 434 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 ERCC6LQ2NKX8 1250 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 SPANXN3Q5MJ09 141 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 LAYNQ6UX15 382 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 TMEM135Q86UB9 458 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 PHYKPLQ8IUZ5 450 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 IGDCC3Q8IVU1 814 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 EIF1ADQ8N9N8 165 aaKnown RBP18.23■□□□□ 0.51
TSSC4-210ENST00000496468 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.23■□□□□ 0.51
TSSC4-210ENST00000496468 OR6P1Q8NGX9 317 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 DTX3LQ8TDB6 740 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 PYROXD1Q8WU10 500 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 HDAC10Q969S8 669 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.23■□□□□ 0.51
TSSC4-210ENST00000496468 CDKN2AIPNLQ96HQ2 116 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 TBATAQ96M53 351 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 SEMA4AQ9H3S1 761 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 SUDS3Q9H7L9 328 aaPredicted RBP18.23■□□□□ 0.51
TSSC4-210ENST00000496468 PHPT1Q9NRX4 125 aaPredicted RBP18.23■□□□□ 0.51
TSSC4-210ENST00000496468 CRLS1Q9UJA2 301 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 GMEB2Q9UKD1 530 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 PCDHGA5Q9Y5G8 931 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 VPS13AQ96RL7 3174 aa18.23■□□□□ 0.51
TSSC4-210ENST00000496468 TP53BP1Q12888 1972 aaPredicted RBP18.22■□□□□ 0.51
TSSC4-210ENST00000496468 CACNA1HO95180 2353 aa18.22■□□□□ 0.51
TSSC4-210ENST00000496468 OR51F1A6NGY5 319 aa18.22■□□□□ 0.51
TSSC4-210ENST00000496468 CACNB4O00305 520 aaPredicted RBP18.22■□□□□ 0.51
TSSC4-210ENST00000496468 INPP4BO15327 924 aa18.22■□□□□ 0.51
TSSC4-210ENST00000496468 GOT2P00505 430 aaKnown RBP18.22■□□□□ 0.51
TSSC4-210ENST00000496468 THEGLP0DJG4 465 aa18.22■□□□□ 0.51
TSSC4-210ENST00000496468 MYCLP1P12525 358 aaPredicted RBP18.22■□□□□ 0.51
TSSC4-210ENST00000496468 MPLP40238 635 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms