RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 ASB7Q9H672 318 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 RPF1Q9H9Y2 349 aaKnown RBP4.44□□□□□ -1.7
VPS52-222ENST00000495981 IL21RQ9HBE5 538 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 PILRBQ9UKJ0 227 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 DAPP1Q9UN19 280 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 ARHGAP26Q9UNA1 814 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 F8P00451 2351 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 CKAP5Q14008 2032 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 ADGRG4Q8IZF6 3080 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 THADAQ6YHU6 1953 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 ICE1Q9Y2F5 2266 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 CEP192Q8TEP8 1941 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 TEX51A0A1B0GUA7 166 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 LOC102723971A0A1B0GUV8 181 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 FAM90A18PA6NE21 464 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 FAM90A16PA6NEW6 464 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 FAM90A9PA6NNJ1 464 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 FAM90A5PA8MXJ8 464 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 KPNA7A9QM74 516 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 H0Y3Z8 333 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 CYB561D2O14569 222 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 CAPN9O14815 690 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 PJA2O43164 708 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 RRP9O43818 475 aaKnown RBP4.43□□□□□ -1.7
VPS52-222ENST00000495981 TBCAO75347 108 aaKnown RBP4.43□□□□□ -1.7
VPS52-222ENST00000495981 STC2O76061 302 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 HAUS5O94927 633 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 OAS1P00973 400 aaKnown RBP4.43□□□□□ -1.7
VPS52-222ENST00000495981 ITGB3P05106 788 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 FAM90A15PP0C7V4 464 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 FAM90A14PP0C7W9 464 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 C6P13671 934 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 DRD1P21728 446 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 SLC6A2P23975 617 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 MARCKSP29966 332 aaPredicted RBP4.43□□□□□ -1.7
VPS52-222ENST00000495981 AVPR1AP37288 418 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 MATR3P43243 847 aaKnown RBP eCLIP4.43□□□□□ -1.7
VPS52-222ENST00000495981 TUFMP49411 452 aaKnown RBP4.43□□□□□ -1.7
VPS52-222ENST00000495981 MAN2A2P49641 1150 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 GZMKP49863 264 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 PAPOLAP51003 745 aaKnown RBP4.43□□□□□ -1.7
VPS52-222ENST00000495981 CACNA2D1P54289 1103 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 RRADP55042 308 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 WNT3P56703 355 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 AP2B1P63010 937 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 VAMP2P63027 116 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 CXADRP78310 365 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 POU5F1Q01860 360 aaKnown RBP4.43□□□□□ -1.7
VPS52-222ENST00000495981 SEMG2Q02383 582 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 TLE3Q04726 772 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 NSUN2Q08J23 767 aaKnown RBP eCLIP4.43□□□□□ -1.7
VPS52-222ENST00000495981 SMARCB1Q12824 385 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 GRSF1Q12849 480 aaKnown RBP eCLIP4.43□□□□□ -1.7
VPS52-222ENST00000495981 LMAN2Q12907 356 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 BFSP1Q12934 665 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 TRPC3Q13507 836 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 PDE1CQ14123 709 aaPredicted RBP4.43□□□□□ -1.7
VPS52-222ENST00000495981 ARHGEF7Q14155 803 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 KCNAB1Q14722 419 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 PTPAQ15257 358 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 ZIK1Q3SY52 487 aaPredicted RBP4.43□□□□□ -1.7
VPS52-222ENST00000495981 FBXO43Q4G163 708 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 TAF1BQ53T94 588 aaPredicted RBP4.43□□□□□ -1.7
VPS52-222ENST00000495981 ANO7Q6IWH7 933 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 GLRX5Q86SX6 157 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 KRT73Q86Y46 540 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 NAXDQ8IW45 347 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 REXO1L1PQ8IX06 675 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 ADGRF2Q8IZF7 708 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 CMTM4Q8IZR5 234 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 Q8N3U1 123 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 HDDC3Q8N4P3 179 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 LRRC52Q8N7C0 313 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 ANKRD52Q8NB46 1076 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 FAM46DQ8NEK8 389 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 OR5M3Q8NGP4 307 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 CPT1CQ8TCG5 803 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 OSCP1Q8WVF1 389 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 IPCEF1Q8WWN9 437 aaPredicted RBP4.43□□□□□ -1.7
VPS52-222ENST00000495981 LARP4BQ92615 738 aaKnown RBP4.43□□□□□ -1.7
VPS52-222ENST00000495981 ATP2A3Q93084 1043 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 MYLPFQ96A32 169 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 SDCCAG3Q96C92 435 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 DNAJC19Q96DA6 116 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 SAAL1Q96ER3 474 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 RSRC1Q96IZ7 334 aaKnown RBP4.43□□□□□ -1.7
VPS52-222ENST00000495981 COG8Q96MW5 612 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 P2RY13Q9BPV8 354 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 SPATA25Q9BR10 227 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 CBWD1Q9BRT8 395 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 PI4K2AQ9BTU6 479 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 NUSAP1Q9BXS6 441 aaKnown RBP4.43□□□□□ -1.7
VPS52-222ENST00000495981 NELFAQ9H3P2 528 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 GSTO2Q9H4Y5 243 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 ECT2Q9H8V3 914 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 CPNE5Q9HCH3 593 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 CD248Q9HCU0 757 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 GCM1Q9NP62 436 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 OLFML3Q9NRN5 406 aa4.43□□□□□ -1.7
VPS52-222ENST00000495981 GKN1Q9NS71 199 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms