RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 COL1A2P08123 1366 aa15.32■□□□□ 0.04
SDF4-207ENST00000494748 SMIM28A0A1B0GU29 152 aa15.32■□□□□ 0.04
SDF4-207ENST00000494748 ANGPT2O15123 496 aa15.32■□□□□ 0.04
SDF4-207ENST00000494748 HLA-DQB2P05538 268 aa15.32■□□□□ 0.04
SDF4-207ENST00000494748 CCNCP24863 283 aa15.32■□□□□ 0.04
SDF4-207ENST00000494748 RAB41Q5JT25 222 aa15.32■□□□□ 0.04
SDF4-207ENST00000494748 SPARTQ8N0X7 666 aa15.32■□□□□ 0.04
SDF4-207ENST00000494748 NSUN5Q96P11 429 aaKnown RBP15.32■□□□□ 0.04
SDF4-207ENST00000494748 PSD2Q9BQI7 771 aa15.32■□□□□ 0.04
SDF4-207ENST00000494748 CCDC68Q9H2F9 335 aa15.32■□□□□ 0.04
SDF4-207ENST00000494748 MUC13Q9H3R2 512 aa15.32■□□□□ 0.04
SDF4-207ENST00000494748 ANAPC2Q9UJX6 822 aa15.32■□□□□ 0.04
SDF4-207ENST00000494748 UBQLN1Q9UMX0 589 aaKnown RBP15.32■□□□□ 0.04
SDF4-207ENST00000494748 GSTM2P28161 218 aa15.32■□□□□ 0.04
SDF4-207ENST00000494748 LIPEQ05469 1076 aa15.32■□□□□ 0.04
SDF4-207ENST00000494748 LDLRAP1Q5SW96 308 aa15.32■□□□□ 0.04
SDF4-207ENST00000494748 ISG20Q96AZ6 181 aaKnown RBP15.32■□□□□ 0.04
SDF4-207ENST00000494748 BIRC7Q96CA5 298 aa15.32■□□□□ 0.04
SDF4-207ENST00000494748 TNIP3Q96KP6 325 aa15.32■□□□□ 0.04
SDF4-207ENST00000494748 ZNF347Q96SE7 839 aa15.32■□□□□ 0.04
SDF4-207ENST00000494748 SMOQ99835 787 aa15.32■□□□□ 0.04
SDF4-207ENST00000494748 LTB4R2Q9NPC1 389 aa15.32■□□□□ 0.04
SDF4-207ENST00000494748 SIX3O95343 332 aaPredicted RBP15.31■□□□□ 0.04
SDF4-207ENST00000494748 ALPLP05186 524 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 UGT2B4P06133 528 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 PRR35P0CG20 571 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 MTHFD2P13995 350 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 CRY1Q16526 586 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 CADM3Q8N126 398 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 DNAJB14Q8TBM8 379 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 TMEM74Q96NL1 305 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 CRTAC1Q9NQ79 661 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 MAGED1Q9Y5V3 778 aaPredicted RBP15.31■□□□□ 0.04
SDF4-207ENST00000494748 PATJQ8NI35 1801 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 HHLA1C9JL84 531 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 H3BMM5 538 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 ANXA9O76027 345 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 GSTT2P0CG29 244 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 GSTT2BP0CG30 244 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 BAG6P46379 1132 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 DIO3P55073 304 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 RCAN2Q14206 197 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 BROXQ5VW32 411 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 IL31Q6EBC2 164 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 PIWIL3Q7Z3Z3 882 aaKnown RBP15.31■□□□□ 0.04
SDF4-207ENST00000494748 SFRP1Q8N474 314 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 VPS33AQ96AX1 596 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 BTN2A3PQ96KV6 586 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 DYTNA2CJ06 578 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 BCAS1O75363 584 aaPredicted RBP15.31■□□□□ 0.04
SDF4-207ENST00000494748 RSL1D1O76021 490 aaKnown RBP15.31■□□□□ 0.04
SDF4-207ENST00000494748 LDLRP01130 860 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 USP17L7P0C7H9 530 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 UMPSP11172 480 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 JAK1P23458 1154 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 HTR1BP28222 390 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 MRPL19P49406 292 aaKnown RBP15.31■□□□□ 0.04
SDF4-207ENST00000494748 IHHQ14623 411 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 ZIK1Q3SY52 487 aaPredicted RBP15.31■□□□□ 0.04
SDF4-207ENST00000494748 XKR4Q5GH76 650 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 R3HCC1LQ7Z5L2 792 aaKnown RBP15.31■□□□□ 0.04
SDF4-207ENST00000494748 GALNT7Q86SF2 657 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 CILP2Q8IUL8 1156 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 ATP13A1Q9HD20 1204 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 KLK14Q9P0G3 267 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 TMED5Q9Y3A6 229 aa15.31■□□□□ 0.04
SDF4-207ENST00000494748 A0A1W2PP18 115 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 HUS1O60921 280 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 CES1P23141 567 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 HPCAL1P37235 193 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 KPNA1P52294 538 aaPredicted RBP15.3■□□□□ 0.04
SDF4-207ENST00000494748 ARSFP54793 590 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 LILRA4P59901 499 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 CTF1Q16619 201 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 TFAP2DQ7Z6R9 452 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 LDB1Q86U70 411 aaPredicted RBP15.3■□□□□ 0.04
SDF4-207ENST00000494748 FUNDC2Q9BWH2 189 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 CHID1Q9BWS9 393 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 RNF39Q9H2S5 420 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 ENTPD7Q9NQZ7 604 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 NDFIP2Q9NV92 336 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 DFFAO00273 331 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 GABRDO14764 452 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 PMPCBO75439 489 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 CD1DP15813 335 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 IL7RP16871 459 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 SOX11P35716 441 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 IREB2P48200 963 aaKnown RBP15.3■□□□□ 0.04
SDF4-207ENST00000494748 EIF2B2P49770 351 aaKnown RBP15.3■□□□□ 0.04
SDF4-207ENST00000494748 TAF6P49848 677 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 BFSP2Q13515 415 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 TMEM214Q6NUQ4 689 aaKnown RBP15.3■□□□□ 0.04
SDF4-207ENST00000494748 KDELC1Q6UW63 502 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 KDELC2Q7Z4H8 507 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 IFNEQ86WN2 208 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 EDEM1Q92611 657 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 KCTD14Q9BQ13 255 aaPredicted RBP15.3■□□□□ 0.04
SDF4-207ENST00000494748 RAD21L1Q9H4I0 556 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 GIN1Q9NXP7 522 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 AZIN1O14977 448 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms