RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 H2AFZP0C0S5 128 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 TMEM253P0C7T8 217 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 PNLIPP16233 465 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 KDELR1P24390 212 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 CCNCP24863 283 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 CD86P42081 329 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 MLLT3P42568 568 aaPredicted RBP11.58□□□□□ -0.56
VTI1A-208ENST00000494728 ARSDP51689 593 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 CFHR1Q03591 330 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 VAC14Q08AM6 782 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 ILF3Q12906 894 aaKnown RBP eCLIP11.58□□□□□ -0.56
VTI1A-208ENST00000494728 LY6DQ14210 128 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 GALNT3Q14435 633 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 MESDQ14696 234 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 PDK2Q15119 407 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 QPCTQ16769 361 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 TSR1Q2NL82 804 aaKnown RBP11.58□□□□□ -0.56
VTI1A-208ENST00000494728 AMZ1Q400G9 498 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 MAP9Q49MG5 647 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 PYCR3Q53H96 274 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 BROXQ5VW32 411 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 NKAIN2Q5VXU1 208 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 TIGD7Q6NT04 549 aaPredicted RBP11.58□□□□□ -0.56
VTI1A-208ENST00000494728 INO80CQ6PI98 192 aaPredicted RBP11.58□□□□□ -0.56
VTI1A-208ENST00000494728 H2AFVQ71UI9 128 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 ZNF761Q86XN6 746 aaPredicted RBP11.58□□□□□ -0.56
VTI1A-208ENST00000494728 JAMLQ86YT9 394 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 LRRC49Q8IUZ0 686 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 VSTM4Q8IW00 320 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 CCDC13Q8IYE1 715 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 RCBTB1Q8NDN9 531 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 OR6C4Q8NGE1 309 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 SLC35G2Q8TBE7 412 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 KIAA1524Q8TCG1 905 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 OLFM3Q96PB7 478 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 OR2M4Q96R27 311 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 GSDMCQ9BYG8 508 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 PCDH9Q9HC56 1237 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 ABHD10Q9NUJ1 306 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 TMEM9Q9P0T7 183 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 CNOT6Q9ULM6 557 aaKnown RBP11.58□□□□□ -0.56
VTI1A-208ENST00000494728 PRKAB1Q9Y478 270 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 PCDHGA7Q9Y5G6 932 aa11.58□□□□□ -0.56
VTI1A-208ENST00000494728 IGHV5-10-1A0A0J9YXX1 117 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 SSU72P8A0A1W2PR75 194 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 EIF4E1BA6NMX2 242 aaKnown RBP11.57□□□□□ -0.56
VTI1A-208ENST00000494728 C9orf172C9J069 976 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 ERVH48-1M5A8F1 160 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 PDE2AO00408 941 aaPredicted RBP11.57□□□□□ -0.56
VTI1A-208ENST00000494728 DNAJC6O75061 913 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 JCHAINP01591 159 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 KRT7P08729 469 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 PIRTP0C851 137 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 CCL4P13236 92 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 ZNF30P17039 623 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 WT1P19544 449 aaPredicted RBP11.57□□□□□ -0.56
VTI1A-208ENST00000494728 CD1CP29017 333 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 ACTR1BP42025 376 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 NOP2P46087 812 aaKnown RBP11.57□□□□□ -0.56
VTI1A-208ENST00000494728 EPHB1P54762 984 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 UCNP55089 124 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 ACTR1AP61163 376 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 IFI35P80217 286 aaPredicted RBP11.57□□□□□ -0.56
VTI1A-208ENST00000494728 PPIDQ08752 370 aaKnown RBP11.57□□□□□ -0.56
VTI1A-208ENST00000494728 EIF3IQ13347 325 aaKnown RBP11.57□□□□□ -0.56
VTI1A-208ENST00000494728 PHF19Q5T6S3 580 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 HENMT1Q5T8I9 393 aaKnown RBP11.57□□□□□ -0.56
VTI1A-208ENST00000494728 SLC9A4Q6AI14 798 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 USP53Q70EK8 1073 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 ZNF765Q7L2R6 523 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 VASH2Q86V25 355 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 CCNYQ8ND76 341 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 OR8K1Q8NGG5 319 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 SLC37A2Q8TED4 501 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 CCDC74BQ96LY2 380 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 TMEM74Q96NL1 305 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 TRIB3Q96RU7 358 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 LYSMD1Q96S90 227 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 STRADBQ9C0K7 418 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 CDH19Q9H159 772 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 GOLPH3Q9H4A6 298 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 ARFGAP3Q9NP61 516 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 ACSL6Q9UKU0 697 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 HEY1Q9Y5J3 304 aa11.57□□□□□ -0.56
VTI1A-208ENST00000494728 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.57□□□□□ -0.567e-6■■□□□ 12.1
VTI1A-208ENST00000494728 MAST4O15021 2626 aa11.56□□□□□ -0.56
VTI1A-208ENST00000494728 C1orf232A0A0U1RR37 186 aa11.56□□□□□ -0.56
VTI1A-208ENST00000494728 TK2O00142 265 aa11.56□□□□□ -0.56
VTI1A-208ENST00000494728 MTA2O94776 668 aa11.56□□□□□ -0.56
VTI1A-208ENST00000494728 ZIC2O95409 532 aaPredicted RBP11.56□□□□□ -0.56
VTI1A-208ENST00000494728 CPNE6O95741 557 aa11.56□□□□□ -0.56
VTI1A-208ENST00000494728 KRT1P04264 644 aa11.56□□□□□ -0.56
VTI1A-208ENST00000494728 JMJD7P0C870 316 aa11.56□□□□□ -0.56
VTI1A-208ENST00000494728 MPSTP25325 297 aa11.56□□□□□ -0.56
VTI1A-208ENST00000494728 ALDH4A1P30038 563 aa11.56□□□□□ -0.56
VTI1A-208ENST00000494728 MAPK10P53779 464 aa11.56□□□□□ -0.56
VTI1A-208ENST00000494728 ZNF648Q5T619 568 aaPredicted RBP11.56□□□□□ -0.56
VTI1A-208ENST00000494728 LYSMD3Q7Z3D4 306 aa11.56□□□□□ -0.56
VTI1A-208ENST00000494728 ZFAND4Q86XD8 727 aa11.56□□□□□ -0.56
VTI1A-208ENST00000494728 RNF214Q8ND24 703 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms