RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 MRPL12P52815 198 aaKnown RBP4.46□□□□□ -1.7
SMC4-224ENST00000494612 ZNF585BQ52M93 769 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 GGNBP1Q5YKI7 109 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 DUS1LQ6P1R4 473 aaKnown RBP4.46□□□□□ -1.7
SMC4-224ENST00000494612 SEPT14Q6ZU15 432 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 DPPA4Q7L190 304 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 TAOK1Q7L7X3 1001 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 SDCCAG8Q86SQ7 713 aaPredicted RBP4.46□□□□□ -1.7
SMC4-224ENST00000494612 TICAM1Q8IUC6 712 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 NSUN4Q96CB9 384 aaKnown RBP4.46□□□□□ -1.7
SMC4-224ENST00000494612 LRFN5Q96NI6 719 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 ZPBPQ9BS86 351 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 PIGMQ9H3S5 423 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 MRPL44Q9H9J2 332 aaKnown RBP4.46□□□□□ -1.7
SMC4-224ENST00000494612 SEBOXQ9HB31 216 aaPredicted RBP4.46□□□□□ -1.7
SMC4-224ENST00000494612 OCIAD1Q9NX40 245 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 COPG2Q9UBF2 871 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 TINAGQ9UJW2 476 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 KIF21AQ7Z4S6 1674 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 LAMC3Q9Y6N6 1575 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 A8MZ25 164 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 SOCS6O14544 535 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 CTDSP2O14595 271 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 NDUFS7O75251 213 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 CENPBP07199 599 aaPredicted RBP4.45□□□□□ -1.7
SMC4-224ENST00000494612 AKR1B1P15121 316 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 TMEM11P17152 192 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 CD58P19256 250 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 GPTP24298 496 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 AMTP48728 403 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 ACSM2AQ08AH3 577 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 PLCB4Q15147 1175 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 SHBQ15464 509 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 RAB41Q5JT25 222 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 MFSD4BQ5TF39 518 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 ACSM2BQ68CK6 577 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 METTL2BQ6P1Q9 378 aaKnown RBP4.45□□□□□ -1.7
SMC4-224ENST00000494612 FOXRED2Q8IWF2 684 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 DCP1BQ8IZD4 617 aaKnown RBP4.45□□□□□ -1.7
SMC4-224ENST00000494612 TMED6Q8WW62 240 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 ORAI1Q96D31 301 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 GRAMD2BQ96HH9 432 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 METTL2AQ96IZ6 378 aaKnown RBP4.45□□□□□ -1.7
SMC4-224ENST00000494612 OR2A14Q96R47 310 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 SMC6Q96SB8 1091 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 CMKLR1Q99788 373 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 SLC25A33Q9BSK2 321 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 ACSS1Q9NUB1 689 aaPredicted RBP4.45□□□□□ -1.7
SMC4-224ENST00000494612 NSMCE4AQ9NXX6 385 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 OGFRQ9NZT2 677 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 CLIC4Q9Y696 253 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 NOTCH4Q99466 2003 aa4.45□□□□□ -1.7
SMC4-224ENST00000494612 BAZ1BQ9UIG0 1483 aaKnown RBP4.44□□□□□ -1.7
SMC4-224ENST00000494612 SERINC4A6NH21 518 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 HCRTR2O43614 444 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 GPC4O75487 556 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 MAOAP21397 527 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 BDKRB2P30411 391 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 PSMB10P40306 273 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 EIF2DP41214 584 aaKnown RBP4.44□□□□□ -1.7
SMC4-224ENST00000494612 PRCPP42785 496 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 MFAP4P55083 255 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 ZXDBP98169 803 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 BNC1Q01954 994 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 Q0VFX4 171 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 TRAF3Q13114 568 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 ACVR2BQ13705 512 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 DHX34Q14147 1143 aaKnown RBP4.44□□□□□ -1.7
SMC4-224ENST00000494612 DLG2Q15700 870 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 TDRD12Q587J7 1177 aaKnown RBP4.44□□□□□ -1.7
SMC4-224ENST00000494612 JADE1Q6IE81 842 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 RPAP2Q8IXW5 612 aaPredicted RBP4.44□□□□□ -1.7
SMC4-224ENST00000494612 PGBD5Q8N414 524 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 SGCDQ92629 289 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 APBB2Q92870 758 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 JAKMIP2Q96AA8 810 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 ZNF479Q96JC4 524 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 PDE7BQ9NP56 450 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 MMP25Q9NPA2 562 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 ANKEF1Q9NU02 776 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 PAG1Q9NWQ8 432 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 SUCLA2Q9P2R7 463 aaPredicted RBP4.44□□□□□ -1.7
SMC4-224ENST00000494612 OR14J1Q9UGF5 321 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 TMEM5Q9Y2B1 443 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 PTRH2Q9Y3E5 179 aaKnown RBP4.44□□□□□ -1.7
SMC4-224ENST00000494612 PDS5BQ9NTI5 1447 aa4.44□□□□□ -1.7
SMC4-224ENST00000494612 SMARCA4P51532 1647 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 KCNJ13O60928 360 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 ICAM1P05362 532 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 SRPRAP08240 638 aaKnown RBP4.43□□□□□ -1.7
SMC4-224ENST00000494612 ACAA1P09110 424 aaPredicted RBP4.43□□□□□ -1.7
SMC4-224ENST00000494612 TGFB3P10600 412 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 SELLP14151 372 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 KRT20P35900 424 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 RAD52P43351 418 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 TAS2R40P59535 323 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 IFI35P80217 286 aaPredicted RBP4.43□□□□□ -1.7
SMC4-224ENST00000494612 PPP2R2BQ00005 443 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 NUCB1Q02818 461 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 CRYZQ08257 329 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms