RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 ZSCAN5AQ9BUG6 496 aa10.06□□□□□ -0.8
RFC2-211ENST00000494019 TEX101Q9BY14 249 aa10.06□□□□□ -0.8
RFC2-211ENST00000494019 SUDS3Q9H7L9 328 aaPredicted RBP10.06□□□□□ -0.8
RFC2-211ENST00000494019 CAAP1Q9H8G2 361 aa10.06□□□□□ -0.8
RFC2-211ENST00000494019 CASS4Q9NQ75 786 aa10.06□□□□□ -0.8
RFC2-211ENST00000494019 IL17CQ9P0M4 197 aa10.06□□□□□ -0.8
RFC2-211ENST00000494019 APOBEC3BQ9UH17 382 aaKnown RBP10.06□□□□□ -0.8
RFC2-211ENST00000494019 ASIC3Q9UHC3 531 aa10.06□□□□□ -0.8
RFC2-211ENST00000494019 PCYOX1Q9UHG3 505 aa10.06□□□□□ -0.8
RFC2-211ENST00000494019 MOSPD1Q9UJG1 213 aa10.06□□□□□ -0.8
RFC2-211ENST00000494019 PNMA8BQ9ULN7 279 aaPredicted RBP10.06□□□□□ -0.8
RFC2-211ENST00000494019 NEU2Q9Y3R4 380 aa10.06□□□□□ -0.8
RFC2-211ENST00000494019 KCTD3Q9Y597 815 aa10.06□□□□□ -0.8
RFC2-211ENST00000494019 ARHGEF17Q96PE2 2063 aaPredicted RBP10.05□□□□□ -0.8
RFC2-211ENST00000494019 CABIN1Q9Y6J0 2220 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 CFAP54Q96N23 3096 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 GLYATL1P3A0A0U1RQE8 302 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 TCRBV7S3A2A0A539 114 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 CCDC78A2IDD5 438 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 TMEM202A6NGA9 273 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 SCAMP1O15126 338 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 FLRT2O43155 660 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 GPR39O43194 453 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 PCDHGA12O60330 932 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 PPFIA2O75334 1257 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 URI1O94763 535 aaPredicted RBP10.05□□□□□ -0.8
RFC2-211ENST00000494019 RASGRP1O95267 797 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 CSF2P04141 144 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 RXRGP48443 463 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 ZNF140P52738 457 aaPredicted RBP10.05□□□□□ -0.8
RFC2-211ENST00000494019 SRP54P61011 504 aaKnown RBP10.05□□□□□ -0.8
RFC2-211ENST00000494019 HNRNPKP61978 463 aaKnown RBP eCLIP10.05□□□□□ -0.8
RFC2-211ENST00000494019 TMPRSS15P98073 1019 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 CKAP4Q07065 602 aaKnown RBP10.05□□□□□ -0.8
RFC2-211ENST00000494019 BNIP3Q12983 259 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 SLC14A1Q13336 389 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 PTK6Q13882 451 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 ALG11Q2TAA5 492 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 INAVAQ3KP66 663 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 ZDHHC20Q5W0Z9 365 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 FAM151BQ6UXP7 276 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 NLRP8Q86W28 1048 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 JAMLQ86YT9 394 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 HID1Q8IV36 788 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 NAXDQ8IW45 347 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 ZNF548Q8NEK5 533 aaPredicted RBP10.05□□□□□ -0.8
RFC2-211ENST00000494019 OR4K2Q8NGD2 314 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 CPT1BQ92523 772 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 TSACCQ96A04 125 aaPredicted RBP10.05□□□□□ -0.8
RFC2-211ENST00000494019 HIC2Q96JB3 615 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 KRT12Q99456 494 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 TRIM51Q9BSJ1 452 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 RTKNQ9BST9 563 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 SLC13A1Q9BZW2 595 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 TCEAL2Q9H3H9 227 aaPredicted RBP10.05□□□□□ -0.8
RFC2-211ENST00000494019 FGF22Q9HCT0 170 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 MRPL40Q9NQ50 206 aaKnown RBP10.05□□□□□ -0.8
RFC2-211ENST00000494019 KLF15Q9UIH9 416 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 FKBPLQ9UIM3 349 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 DNAH14Q0VDD8 3507 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 GVINP1Q7Z2Y8 2422 aa10.05□□□□□ -0.8
RFC2-211ENST00000494019 ZNF292O60281 2723 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 PRSS38A1L453 326 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 HEATR9A2RTY3 570 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 CCL22O00626 93 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 FFAR2O15552 330 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 TTI1O43156 1089 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 LDB2O43679 373 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 PIAS2O75928 621 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 TMEM63AO94886 807 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 PRAMEF1O95521 474 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 ASMTLO95671 621 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 TUBB4AP04350 444 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 HOXC4P09017 264 aaPredicted RBP10.04□□□□□ -0.8
RFC2-211ENST00000494019 CD59P13987 128 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 SDHBP21912 280 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 ADCY8P40145 1251 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 HADHAP40939 763 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 PTGIRP43119 386 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 MAGEA6P43360 314 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 BLKP51451 505 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 HK3P52790 923 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 SESN2P58004 480 aaPredicted RBP10.04□□□□□ -0.8
RFC2-211ENST00000494019 SARNPP82979 210 aaKnown RBP10.04□□□□□ -0.8
RFC2-211ENST00000494019 CDK16Q00536 496 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 ITGA9Q13797 1035 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 DHX34Q14147 1143 aaKnown RBP10.04□□□□□ -0.8
RFC2-211ENST00000494019 SUZ12Q15022 739 aaKnown RBP10.04□□□□□ -0.8
RFC2-211ENST00000494019 TCEA2Q15560 299 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 ATP13A5Q4VNC0 1218 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 CCDC38Q502W7 563 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 PRRT3Q5FWE3 981 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 CERCAMQ5T4B2 595 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 ANKRD22Q5VYY1 191 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 KCTD16Q68DU8 428 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 PDPK2PQ6A1A2 396 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 SYDE1Q6ZW31 735 aaPredicted RBP10.04□□□□□ -0.8
RFC2-211ENST00000494019 ZNF534Q76KX8 674 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 PHYKPLQ8IUZ5 450 aa10.04□□□□□ -0.8
RFC2-211ENST00000494019 SPATA4Q8NEY3 305 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms