RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 AP1G1O43747 822 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 BRINP1O60477 761 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 CCDC22O60826 627 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 CKMP06732 381 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 CCNA2P20248 432 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 STAT1P42224 750 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 RPL5P46777 297 aaKnown RBP11.59□□□□□ -0.55
BRCA1-222ENST00000493919 VAV2P52735 878 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 NKX2-5P52952 324 aaPredicted RBP11.59□□□□□ -0.55
BRCA1-222ENST00000493919 AIF1P55008 147 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 JAM2P57087 298 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 VAC14Q08AM6 782 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 ADIGQ0VDE8 80 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 HECTD3Q5T447 861 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 TXNDC8Q6A555 127 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 DENND1BQ6P3S1 775 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 POTEHQ6S545 545 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 PARM1Q6UWI2 310 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 SCUBE3Q8IX30 993 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 ZDHHC14Q8IZN3 488 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 SIX6OS1Q8N1H7 587 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 CENPSQ8N2Z9 138 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 TBC1D19Q8N5T2 526 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 RNF139Q8WU17 664 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 FGF14Q92915 247 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 FOXJ1Q92949 421 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 MAP6Q96JE9 813 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 ZFRQ96KR1 1074 aaKnown RBP11.59□□□□□ -0.55
BRCA1-222ENST00000493919 KXD1Q9BQD3 176 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 SLC4A5Q9BY07 1137 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 FBXO44Q9H4M3 255 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 LRRC4Q9HBW1 653 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 SEMA3GQ9NS98 782 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 B3GNT3Q9Y2A9 372 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 ZFP37Q9Y6Q3 630 aaPredicted RBP11.59□□□□□ -0.55
BRCA1-222ENST00000493919 DENND4CQ5VZ89 1909 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 LOC100653049A0A140TA62 436 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 A0A1B0GTQ1 180 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 C2orf78A6NCI8 922 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 ZNF98A6NK75 572 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 RIPK2O43353 540 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 KRT34O76011 436 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 LCP1P13796 627 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 HOXB3P14651 431 aaPredicted RBP11.58□□□□□ -0.55
BRCA1-222ENST00000493919 ANPEPP15144 967 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 CYP11B1P15538 503 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 HTR7P34969 479 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 AVPR1AP37288 418 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 TKTL1P51854 596 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 PKDCCQ504Y2 493 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 FAM78AQ5JUQ0 283 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 RBM20Q5T481 1227 aaKnown RBP11.58□□□□□ -0.55
BRCA1-222ENST00000493919 LRIG3Q6UXM1 1119 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 ASPGQ86U10 573 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 ADGRG5Q8IZF4 528 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 SLC26A7Q8TE54 656 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 LPGAT1Q92604 370 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 PBKQ96KB5 322 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 TRIM62Q9BVG3 475 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 C1QTNF7Q9BXJ2 289 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 COL25A1Q9BXS0 654 aaPredicted RBP11.58□□□□□ -0.55
BRCA1-222ENST00000493919 SMG9Q9H0W8 520 aaKnown RBP11.58□□□□□ -0.55
BRCA1-222ENST00000493919 DPH5Q9H2P9 285 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 TASP1Q9H6P5 420 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 KCNK12Q9HB15 430 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 CHORDC1Q9UHD1 332 aaPredicted RBP11.58□□□□□ -0.55
BRCA1-222ENST00000493919 MUTYHQ9UIF7 546 aa11.58□□□□□ -0.55
BRCA1-222ENST00000493919 CUL9Q8IWT3 2517 aa11.58□□□□□ -0.56
BRCA1-222ENST00000493919 NUP210Q8TEM1 1887 aaPredicted RBP11.58□□□□□ -0.56
BRCA1-222ENST00000493919 CCRL2O00421 344 aa11.58□□□□□ -0.56
BRCA1-222ENST00000493919 USP17L7P0C7H9 530 aa11.58□□□□□ -0.56
BRCA1-222ENST00000493919 RAP1GDS1P52306 607 aa11.58□□□□□ -0.56
BRCA1-222ENST00000493919 ARFIP1P53367 373 aa11.58□□□□□ -0.56
BRCA1-222ENST00000493919 HTR4Q13639 388 aa11.58□□□□□ -0.56
BRCA1-222ENST00000493919 HERC3Q15034 1050 aa11.58□□□□□ -0.56
BRCA1-222ENST00000493919 PPA1Q15181 289 aa11.58□□□□□ -0.56
BRCA1-222ENST00000493919 ACAD11Q709F0 780 aa11.58□□□□□ -0.56
BRCA1-222ENST00000493919 MTSS1LQ765P7 747 aa11.58□□□□□ -0.56
BRCA1-222ENST00000493919 TMEM139Q8IV31 216 aa11.58□□□□□ -0.56
BRCA1-222ENST00000493919 GRPEL2Q8TAA5 225 aa11.58□□□□□ -0.56
BRCA1-222ENST00000493919 EPS8L1Q8TE68 723 aa11.58□□□□□ -0.56
BRCA1-222ENST00000493919 SMARCD2Q92925 531 aa11.58□□□□□ -0.56
BRCA1-222ENST00000493919 ASB16Q96NS5 453 aa11.58□□□□□ -0.56
BRCA1-222ENST00000493919 C17orf62Q9BQA9 187 aa11.58□□□□□ -0.56
BRCA1-222ENST00000493919 ULBP1Q9BZM6 244 aa11.58□□□□□ -0.56
BRCA1-222ENST00000493919 PAIP1Q9H074 479 aaKnown RBP11.58□□□□□ -0.56
BRCA1-222ENST00000493919 XKR8Q9H6D3 395 aa11.58□□□□□ -0.56
BRCA1-222ENST00000493919 NCKIPSDQ9NZQ3 722 aa11.58□□□□□ -0.56
BRCA1-222ENST00000493919 FETUBQ9UGM5 382 aa11.58□□□□□ -0.56
BRCA1-222ENST00000493919 CYB5R1Q9UHQ9 305 aa11.58□□□□□ -0.56
BRCA1-222ENST00000493919 ANAPC1Q9H1A4 1944 aa11.58□□□□□ -0.56
BRCA1-222ENST00000493919 TRAV19A0A0A6YYK7 116 aa11.57□□□□□ -0.56
BRCA1-222ENST00000493919 ZNF840PA6NDX5 716 aa11.57□□□□□ -0.56
BRCA1-222ENST00000493919 ARGFXA6NJG6 315 aa11.57□□□□□ -0.56
BRCA1-222ENST00000493919 LRRC53A6NM62 1247 aa11.57□□□□□ -0.56
BRCA1-222ENST00000493919 DPYSL4O14531 572 aa11.57□□□□□ -0.56
BRCA1-222ENST00000493919 NOS1APO75052 506 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-222ENST00000493919 PRAMEF12O95522 483 aa11.57□□□□□ -0.56
BRCA1-222ENST00000493919 ZBTB11O95625 1053 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-222ENST00000493919 CLPTM1O96005 669 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms