RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 BPTFQ12830 3046 aa11.56□□□□□ -0.56
CTSA-209ENST00000493522 ERI2A8K979 691 aaKnown RBP11.55□□□□□ -0.56
CTSA-209ENST00000493522 PDE2AO00408 941 aaPredicted RBP11.55□□□□□ -0.56
CTSA-209ENST00000493522 PCDHGA12O60330 932 aa11.55□□□□□ -0.56
CTSA-209ENST00000493522 ECEL1O95672 775 aa11.55□□□□□ -0.56
CTSA-209ENST00000493522 TERF1P54274 439 aa11.55□□□□□ -0.56
CTSA-209ENST00000493522 PTSQ03393 145 aa11.55□□□□□ -0.56
CTSA-209ENST00000493522 GPS1Q13098 491 aa11.55□□□□□ -0.56
CTSA-209ENST00000493522 SEMA5AQ13591 1074 aa11.55□□□□□ -0.56
CTSA-209ENST00000493522 PDE1CQ14123 709 aaPredicted RBP11.55□□□□□ -0.56
CTSA-209ENST00000493522 PPP1R7Q15435 360 aa11.55□□□□□ -0.56
CTSA-209ENST00000493522 ALS2CLQ60I27 953 aa11.55□□□□□ -0.56
CTSA-209ENST00000493522 KCTD11Q693B1 232 aa11.55□□□□□ -0.56
CTSA-209ENST00000493522 RAET1GQ6H3X3 334 aa11.55□□□□□ -0.56
CTSA-209ENST00000493522 ESRP1Q6NXG1 681 aaKnown RBP11.55□□□□□ -0.56
CTSA-209ENST00000493522 C4orf22Q6V702 233 aa11.55□□□□□ -0.56
CTSA-209ENST00000493522 PPP1R21Q6ZMI0 780 aa11.55□□□□□ -0.56
CTSA-209ENST00000493522 RFLNAQ6ZTI6 216 aa11.55□□□□□ -0.56
CTSA-209ENST00000493522 LINC00523Q86TU6 105 aa11.55□□□□□ -0.56
CTSA-209ENST00000493522 KLHL7Q8IXQ5 586 aa11.55□□□□□ -0.56
CTSA-209ENST00000493522 KLHDC8BQ8IXV7 354 aa11.55□□□□□ -0.56
CTSA-209ENST00000493522 SLC22A18ASQ8N1D0 253 aa11.55□□□□□ -0.56
CTSA-209ENST00000493522 PLA2G15Q8NCC3 412 aa11.55□□□□□ -0.56
CTSA-209ENST00000493522 AP2M1Q96CW1 435 aa11.55□□□□□ -0.56
CTSA-209ENST00000493522 BMFQ96LC9 184 aa11.55□□□□□ -0.56
CTSA-209ENST00000493522 ABCG8Q9H221 673 aa11.55□□□□□ -0.56
CTSA-209ENST00000493522 TRABDQ9H4I3 376 aa11.55□□□□□ -0.56
CTSA-209ENST00000493522 BTBD3Q9Y2F9 522 aa11.55□□□□□ -0.56
CTSA-209ENST00000493522 KALRNO60229 2985 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 TRABD2BA6NFA1 517 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 CCDC188H7C350 402 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 K7ESM1 405 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 KIF2AO00139 706 aaPredicted RBP11.54□□□□□ -0.56
CTSA-209ENST00000493522 CACNB4O00305 520 aaPredicted RBP11.54□□□□□ -0.56
CTSA-209ENST00000493522 AURKAO14965 403 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 APRTP07741 180 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 TSHRP16473 764 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 GPR1P46091 355 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 SPINT3P49223 89 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 PFN3P60673 137 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 IL9RQ01113 521 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 CYP4F3Q08477 520 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 SEPT6Q14141 434 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 INPP5AQ14642 412 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 SMAD1Q15797 465 aaKnown RBP11.54□□□□□ -0.56
CTSA-209ENST00000493522 CDKN3Q16667 212 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 RANBP10Q6VN20 620 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 ZNF765Q7L2R6 523 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 TECPR1Q7Z6L1 1165 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 SPATS2Q86XZ4 545 aaKnown RBP11.54□□□□□ -0.56
CTSA-209ENST00000493522 NRSN1Q8IZ57 195 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 TTC30BQ8N4P2 665 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 OXR1Q8N573 874 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 SCAMP4Q969E2 229 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 RIOK2Q9BVS4 552 aaKnown RBP11.54□□□□□ -0.56
CTSA-209ENST00000493522 WDR26Q9H7D7 661 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 PIH1D1Q9NWS0 290 aaKnown RBP11.54□□□□□ -0.56
CTSA-209ENST00000493522 RNF14Q9UBS8 474 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 FTSJ1Q9UET6 329 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 FEZ2Q9UHY8 353 aaPredicted RBP11.54□□□□□ -0.56
CTSA-209ENST00000493522 OR1A2Q9Y585 309 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 URB1O60287 2271 aaKnown RBP11.54□□□□□ -0.56
CTSA-209ENST00000493522 PTPRBP23467 1997 aa11.54□□□□□ -0.56
CTSA-209ENST00000493522 PIKFYVEQ9Y2I7 2098 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 A0A087WV48 116 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 BUD23O43709 281 aaKnown RBP11.53□□□□□ -0.56
CTSA-209ENST00000493522 DFNA5O60443 496 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 HTR1BP28222 390 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 ARRB1P49407 418 aaPredicted RBP11.53□□□□□ -0.56
CTSA-209ENST00000493522 YPEL5P62699 121 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 CDH17Q12864 832 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 PTK2BQ14289 1009 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 NFATC4Q14934 902 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 CCDC157Q569K6 752 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 PRAMEF14Q5SWL7 426 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 TPRG1LQ5T0D9 272 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 DENND5AQ6IQ26 1287 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 PNCKQ6P2M8 343 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 MACC1Q6ZN28 852 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 TMC3Q7Z5M5 1100 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 PARGQ86W56 976 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 HEATR4Q86WZ0 1026 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 DCP2Q8IU60 420 aaKnown RBP11.53□□□□□ -0.56
CTSA-209ENST00000493522 PELI3Q8N2H9 469 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 CBARPQ8N350 705 aaPredicted RBP11.53□□□□□ -0.56
CTSA-209ENST00000493522 DNAAF3Q8N9W5 541 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 SPDYE1Q8NFV5 336 aaPredicted RBP11.53□□□□□ -0.56
CTSA-209ENST00000493522 OR52K1Q8NGK4 314 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 RUNDC3BQ96NL0 473 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 APOOQ9BUR5 198 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 SPATA16Q9BXB7 569 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 FAM83DQ9H4H8 585 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 BPIFA1Q9NP55 256 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 EIF2B3Q9NR50 452 aaKnown RBP11.53□□□□□ -0.56
CTSA-209ENST00000493522 PHPT1Q9NRX4 125 aaPredicted RBP11.53□□□□□ -0.56
CTSA-209ENST00000493522 GPR27Q9NS67 375 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 RAD18Q9NS91 495 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 DNAJC28Q9NX36 388 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.53□□□□□ -0.564e-7■□□□□ 10.1
CTSA-209ENST00000493522 ASIC3Q9UHC3 531 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms