RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 LHPPQ9H008 270 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 GAREM1Q9H706 876 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 SDF2L1Q9HCN8 221 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 PAG1Q9NWQ8 432 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 MCM9Q9NXL9 1143 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 MALT1Q9UDY8 824 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 KLQ9UEF7 1012 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 PLXNA3P51805 1871 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 PDCD11Q14690 1871 aaKnown RBP3.3□□□□□ -1.88
PTCD3-218ENST00000493430 KIF26AQ9ULI4 1882 aaPredicted RBP3.3□□□□□ -1.88
PTCD3-218ENST00000493430 TCHHQ07283 1943 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 PFASO15067 1338 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 PDS5AQ29RF7 1337 aaKnown RBP3.29□□□□□ -1.88
PTCD3-218ENST00000493430 A0A0A0MQY5 61 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 A0A0U1RQJ8 604 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 MAGEA13PA6NCF6 341 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 GOLGA6L3A6NEY3 463 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 GPAA1O43292 621 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 PGK2P07205 417 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 ITGA2BP08514 1039 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 IFIT2P09913 472 aaKnown RBP3.29□□□□□ -1.88
PTCD3-218ENST00000493430 CKMT1AP12532 417 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 CYP4B1P13584 511 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 SKIV2L2P42285 1042 aaKnown RBP3.29□□□□□ -1.88
PTCD3-218ENST00000493430 DPP6P42658 865 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 TECP42680 631 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 RPS6KA3P51812 740 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 ADORA2A-AS1P86434 159 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 GABPAQ06546 454 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 MYBPHQ13203 477 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 CTTNQ14247 550 aaKnown RBP3.29□□□□□ -1.88
PTCD3-218ENST00000493430 STARD3Q14849 445 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 FAM83BQ5T0W9 1011 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 FKBP1CQ5VVH2 108 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 Q7L0L9 218 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 RAB11FIP2Q7L804 512 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 GALNT7Q86SF2 657 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 TRIM74Q86UV6 250 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 TRIM73Q86UV7 250 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 TBC1D10CQ8IV04 446 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 LMNTD1Q8N9Z9 388 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 OR1N1Q8NGS0 311 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 RAET1EQ8TD07 263 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 CPT1BQ92523 772 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 EID2BQ96D98 161 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 BICD1Q96G01 975 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 TMEM41AQ96HV5 264 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 PARK7Q99497 189 aaKnown RBP3.29□□□□□ -1.88
PTCD3-218ENST00000493430 RPAP3Q9H6T3 665 aaPredicted RBP3.29□□□□□ -1.88
PTCD3-218ENST00000493430 SEPSECSQ9HD40 501 aaKnown RBP3.29□□□□□ -1.88
PTCD3-218ENST00000493430 ISY1Q9ULR0 285 aaKnown RBP3.29□□□□□ -1.88
PTCD3-218ENST00000493430 DDX19BQ9UMR2 479 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 PHTF1Q9UMS5 762 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 DAPP1Q9UN19 280 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 C19orf53Q9UNZ5 99 aaPredicted RBP3.29□□□□□ -1.88
PTCD3-218ENST00000493430 AGTPBP1Q9UPW5 1226 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 COL4A6Q14031 1691 aa3.29□□□□□ -1.88
PTCD3-218ENST00000493430 PRRC2BQ5JSZ5 2229 aaKnown RBP3.28□□□□□ -1.88
PTCD3-218ENST00000493430 ASTN1O14525 1302 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 NEDD4P46934 1319 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 CLGNO14967 610 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 SYN3O14994 580 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 LMX1BO60663 402 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 TNFRSF6BO95407 300 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 TFRCP02786 760 aaKnown RBP3.28□□□□□ -1.88
PTCD3-218ENST00000493430 EEF2P13639 858 aaKnown RBP3.28□□□□□ -1.88
PTCD3-218ENST00000493430 YWHAQP27348 245 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 GPR12P47775 334 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 BACE1P56817 501 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 IRX3P78415 501 aaPredicted RBP3.28□□□□□ -1.88
PTCD3-218ENST00000493430 GSTO1P78417 241 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 BTKQ06187 659 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 DLG1Q12959 904 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 PTK2BQ14289 1009 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 RBM39Q14498 530 aaKnown RBP3.28□□□□□ -1.88
PTCD3-218ENST00000493430 GALNTL6Q49A17 601 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 CEP85LQ5SZL2 805 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 ZNF449Q6P9G9 518 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 CTR9Q6PD62 1173 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 NEK10Q6ZWH5 1172 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 ZNF771Q7L3S4 317 aaPredicted RBP3.28□□□□□ -1.88
PTCD3-218ENST00000493430 GPR142Q7Z601 462 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 DCUN1D3Q8IWE4 304 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 NAGSQ8N159 534 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 SCAIQ8N9R8 606 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 ZNF114Q8NC26 417 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 SPATA20Q8TB22 786 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 U2AF1L4Q8WU68 220 aaKnown RBP3.28□□□□□ -1.88
PTCD3-218ENST00000493430 KIF1BPQ96EK5 621 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 TNIP3Q96KP6 325 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 SGCZQ96LD1 299 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 FSD1Q9BTV5 496 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 LRRCC1Q9C099 1032 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 ABHD16BQ9H3Z7 469 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 ELAC1Q9H777 363 aaKnown RBP3.28□□□□□ -1.88
PTCD3-218ENST00000493430 GPR108Q9NPR9 543 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 NDUFAF4Q9P032 175 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 FNIP2Q9P278 1114 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 GJD2Q9UKL4 321 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 DHDHQ9UQ10 334 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms