RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 TUBB2BQ9BVA1 445 aa8.1□□□□□ -1.11
TM4SF1-204ENST00000493348 RIOK2Q9BVS4 552 aaKnown RBP8.1□□□□□ -1.11
TM4SF1-204ENST00000493348 DDX47Q9H0S4 455 aaKnown RBP8.1□□□□□ -1.11
TM4SF1-204ENST00000493348 ABCG8Q9H221 673 aa8.1□□□□□ -1.11
TM4SF1-204ENST00000493348 EIF2B3Q9NR50 452 aaKnown RBP8.1□□□□□ -1.11
TM4SF1-204ENST00000493348 DNAAF2Q9NVR5 837 aaKnown RBP8.1□□□□□ -1.11
TM4SF1-204ENST00000493348 SMARCAL1Q9NZC9 954 aa8.1□□□□□ -1.11
TM4SF1-204ENST00000493348 SAMD15Q9P1V8 674 aa8.1□□□□□ -1.11
TM4SF1-204ENST00000493348 PCDHGB2Q9Y5G2 931 aa8.1□□□□□ -1.11
TM4SF1-204ENST00000493348 SLCO1B1Q9Y6L6 691 aa8.1□□□□□ -1.11
TM4SF1-204ENST00000493348 SLC30A1Q9Y6M5 507 aa8.1□□□□□ -1.11
TM4SF1-204ENST00000493348 GLYATL1P3A0A0U1RQE8 302 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 A0A0U1RQS6 177 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 F8W8V4 182 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 TNFRSF10CO14798 259 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 SLC30A4O14863 429 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 PFDN6O15212 129 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 CSF2P04141 144 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 ANXA6P08133 673 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 HOXC4P09017 264 aaPredicted RBP8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 ZSCAN5DPP0CG00 497 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 RALBP11234 206 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 TPH1P17752 444 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 TPSB2P20231 275 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 ITGALP20701 1170 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 TGM1P22735 817 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 EPHA8P29322 1005 aaPredicted RBP8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 AKT1P31749 480 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 ADRA1AP35348 466 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 TRIM23P36406 574 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 PPARGP37231 505 aaPredicted RBP8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 RXRGP48443 463 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 NPY2RP49146 381 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 SESN2P58004 480 aaPredicted RBP8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 DCDC1P59894 354 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 TMPRSS15P98073 1019 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 DAB2P98082 770 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 CDK3Q00526 305 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 DHX34Q14147 1143 aaKnown RBP8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 IHHQ14623 411 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 PUM1Q14671 1186 aaKnown RBP eCLIP8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 PTPRRQ15256 657 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 TPSAB1Q15661 275 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 ZNF542PQ5EBM4 170 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 PRRT3Q5FWE3 981 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 CASC4Q6P4E1 433 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 FAM151BQ6UXP7 276 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 ADAMTSL4Q6UY14 1074 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 GALNT13Q8IUC8 556 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 CREG2Q8IUH2 290 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 NAXDQ8IW45 347 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 PHACTR4Q8IZ21 702 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 SLC22A18ASQ8N1D0 253 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 FSTL5Q8N475 847 aaPredicted RBP8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 PLA2G15Q8NCC3 412 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 OR4K2Q8NGD2 314 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 OR52K1Q8NGK4 314 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 OR2I1PQ8NGU4 316 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 LMX1AQ8TE12 382 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 FUBP1Q96AE4 644 aaKnown RBP8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 ULK4Q96C45 1275 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 DCUN1D1Q96GG9 259 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 SMIM14Q96QK8 99 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 CDC6Q99741 560 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 DUSP23Q9BVJ7 150 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 CARS2Q9HA77 564 aaKnown RBP8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 ARNT2Q9HBZ2 717 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 CYP4F12Q9HCS2 524 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 FTSJ1Q9UET6 329 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 CRLS1Q9UJA2 301 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 ANAPC5Q9UJX4 755 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 GPSM3Q9Y4H4 160 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 SPO11Q9Y5K1 396 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 ARL5AQ9Y689 179 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 ZFC3H1O60293 1989 aaKnown RBP8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 SCN8AQ9UQD0 1980 aa8.09□□□□□ -1.11
TM4SF1-204ENST00000493348 GOLGA4Q13439 2230 aaKnown RBP8.09□□□□□ -1.12
TM4SF1-204ENST00000493348 MYLKQ15746 1914 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 PRSS38A1L453 326 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 C10orf142B7Z368 130 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 CFAP99D6REC4 459 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 CDX4O14627 284 aaPredicted RBP8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 AQP9O43315 295 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 BUD23O43709 281 aaKnown RBP8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 PCDHGA12O60330 932 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 SDC3O75056 442 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 SUN1O94901 812 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 NME1P15531 152 aaKnown RBP8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 BPIP17213 487 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 VCLP18206 1134 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 PAMP19021 973 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 MSH3P20585 1137 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 ADRA1DP25100 572 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 GNPDA1P46926 289 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 RPIAP49247 311 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 PPM1FP49593 454 aaPredicted RBP8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 DUSP3P51452 185 aaPredicted RBP8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 NOVA1P51513 510 aaKnown RBP8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 HK3P52790 923 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 PRAMEP78395 509 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms