RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 NUDT4Q9NZJ9 180 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 ZNF214Q9UL59 606 aaPredicted RBP16.26■□□□□ 0.19
BRAT1-206ENST00000493232 CORO1CQ9ULV4 474 aaPredicted RBP16.26■□□□□ 0.19
BRAT1-206ENST00000493232 ADGRB2O60241 1585 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 MDM4O15151 490 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 SCN2BO60939 215 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 IPO13O94829 963 aaKnown RBP16.26■□□□□ 0.19
BRAT1-206ENST00000493232 C2P06681 752 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 ARL2P36404 184 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 CDH4P55283 916 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 LAPTM5Q13571 262 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 TIGD2Q4W5G0 525 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 CEP68Q76N32 757 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 PARGQ86W56 976 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 ACBD6Q9BR61 282 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 CCDC28BQ9BUN5 200 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 HBS1LQ9Y450 684 aaKnown RBP16.26■□□□□ 0.19
BRAT1-206ENST00000493232 NRP2O60462 931 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 LYPLA1O75608 230 aaPredicted RBP16.26■□□□□ 0.19
BRAT1-206ENST00000493232 PTDSS1P48651 473 aaKnown RBP16.26■□□□□ 0.19
BRAT1-206ENST00000493232 SLC7A2P52569 658 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 PTGES3Q15185 160 aaKnown RBP16.26■□□□□ 0.19
BRAT1-206ENST00000493232 PWWP2AQ96N64 755 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 MYOCQ99972 504 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 TDRD1Q9BXT4 1180 aaKnown RBP16.26■□□□□ 0.19
BRAT1-206ENST00000493232 MUC13Q9H3R2 512 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 ERVW-1Q9UQF0 538 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 TMEM88BA6NKF7 163 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 MFSD11O43934 449 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 TSPAN1O60635 241 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 PRMT3O60678 531 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 SEC24AO95486 1093 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 OGNP20774 298 aaKnown RBP16.26■□□□□ 0.19
BRAT1-206ENST00000493232 ENPEPQ07075 957 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 RBM23Q86U06 439 aaKnown RBP16.26■□□□□ 0.19
BRAT1-206ENST00000493232 FBXO22Q8NEZ5 403 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 OR6K2Q8NGY2 324 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 AGAP11Q8TF27 550 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 LRRN4Q8WUT4 740 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 UPF1Q92900 1129 aaKnown RBP eCLIP16.26■□□□□ 0.19
BRAT1-206ENST00000493232 PIGUQ9H490 435 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 CAB39LQ9H9S4 337 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 COMMD9Q9P000 198 aa16.26■□□□□ 0.19
BRAT1-206ENST00000493232 LRIG2O94898 1065 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 CDK9P50750 372 aaKnown RBP16.25■□□□□ 0.19
BRAT1-206ENST00000493232 CDH13P55290 713 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 FUT2Q10981 343 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 RALGDSQ12967 914 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 DGKZQ13574 1117 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 RHBDF2Q6PJF5 856 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 CHST9Q7L1S5 443 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 FAM124AQ86V42 546 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 DQX1Q8TE96 717 aaKnown RBP16.25■□□□□ 0.19
BRAT1-206ENST00000493232 NKD2Q969F2 451 aaPredicted RBP16.25■□□□□ 0.19
BRAT1-206ENST00000493232 SLC28A3Q9HAS3 691 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 LRTM1Q9HBL6 345 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 ZNF490Q9ULM2 529 aaPredicted RBP16.25■□□□□ 0.19
BRAT1-206ENST00000493232 MROH1Q8NDA8 1641 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 A0A0U1RQJ8 604 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 UGT2B17O75795 530 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 CDK14O94921 469 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 UGT2B4P06133 528 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 SP100P23497 879 aaPredicted RBP16.25■□□□□ 0.19
BRAT1-206ENST00000493232 RPL5P46777 297 aaKnown RBP16.25■□□□□ 0.19
BRAT1-206ENST00000493232 MYBPC1Q00872 1141 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 PTP4A2Q12974 167 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 KLHL12Q53G59 568 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 DDI2Q5TDH0 399 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 ATAD1Q8NBU5 361 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 ADAMTS15Q8TE58 950 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 MAGEH1Q9H213 219 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 GOLGA2P5Q9HBQ8 144 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 PNPOQ9NVS9 261 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 KRT36O76013 467 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 TRAP1Q12931 704 aaKnown RBP16.25■□□□□ 0.19
BRAT1-206ENST00000493232 FAM92BQ6ZTR7 304 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 MON1BQ7L1V2 547 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.25■□□□□ 0.19
BRAT1-206ENST00000493232 SLAIN1Q8ND83 568 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 ZHX1-C8orf76Q96EF9 292 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 NECTIN3Q9NQS3 549 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 SSR3Q9UNL2 185 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 PLLPQ9Y342 182 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 COLEC10Q9Y6Z7 277 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 A0A0J9YYE9 177 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 BTBD19C9JJ37 291 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 AP2A1O95782 977 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 ADARP55265 1226 aaKnown RBP16.25■□□□□ 0.19
BRAT1-206ENST00000493232 SRP54P61011 504 aaKnown RBP16.25■□□□□ 0.19
BRAT1-206ENST00000493232 C9orf64Q5T6V5 341 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 KIF1AQ12756 1690 aa16.25■□□□□ 0.19
BRAT1-206ENST00000493232 A0A1B0GVM2 712 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 TCAF2A6NFQ2 919 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 DDX3YO15523 660 aaKnown RBP16.24■□□□□ 0.19
BRAT1-206ENST00000493232 PNLIPRP1P54315 467 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 AP1S1P61966 158 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 ALYREFQ86V81 257 aaKnown RBP16.24■□□□□ 0.19
BRAT1-206ENST00000493232 CPSF7Q8N684 471 aaKnown RBP16.24■□□□□ 0.19
BRAT1-206ENST00000493232 FEM1CQ96JP0 617 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 ZNF354BQ96LW1 612 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms