RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 GPS1Q13098 491 aa13.89□□□□□ -0.19
CCM2-217ENST00000492883 MSLNQ13421 630 aaPredicted RBP13.89□□□□□ -0.19
CCM2-217ENST00000492883 C1orf61Q13536 156 aa13.89□□□□□ -0.19
CCM2-217ENST00000492883 PTPRCAPQ14761 206 aa13.89□□□□□ -0.19
CCM2-217ENST00000492883 PRRT3Q5FWE3 981 aa13.89□□□□□ -0.19
CCM2-217ENST00000492883 DOK6Q6PKX4 331 aa13.89□□□□□ -0.19
CCM2-217ENST00000492883 DGLUCYQ7Z3D6 616 aa13.89□□□□□ -0.19
CCM2-217ENST00000492883 PIP4P1Q86T03 277 aa13.89□□□□□ -0.19
CCM2-217ENST00000492883 SLC25A45Q8N413 288 aa13.89□□□□□ -0.19
CCM2-217ENST00000492883 EID2Q8N6I1 236 aa13.89□□□□□ -0.19
CCM2-217ENST00000492883 OR4K2Q8NGD2 314 aa13.89□□□□□ -0.19
CCM2-217ENST00000492883 C16orf45Q96MC5 204 aaPredicted RBP13.89□□□□□ -0.19
CCM2-217ENST00000492883 PLEKHG4BQ96PX9 1271 aa13.89□□□□□ -0.19
CCM2-217ENST00000492883 ZSCAN5AQ9BUG6 496 aa13.89□□□□□ -0.19
CCM2-217ENST00000492883 DDX47Q9H0S4 455 aaKnown RBP13.89□□□□□ -0.19
CCM2-217ENST00000492883 TCEAL2Q9H3H9 227 aaPredicted RBP13.89□□□□□ -0.19
CCM2-217ENST00000492883 CYP4F12Q9HCS2 524 aa13.89□□□□□ -0.19
CCM2-217ENST00000492883 MRPL40Q9NQ50 206 aaKnown RBP13.89□□□□□ -0.19
CCM2-217ENST00000492883 PNMA8BQ9ULN7 279 aaPredicted RBP13.89□□□□□ -0.19
CCM2-217ENST00000492883 BTBD3Q9Y2F9 522 aa13.89□□□□□ -0.19
CCM2-217ENST00000492883 TMEM98Q9Y2Y6 226 aa13.89□□□□□ -0.19
CCM2-217ENST00000492883 DMDP11532 3685 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 PRSS38A1L453 326 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 FFAR2O15552 330 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 AQP9O43315 295 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 SLC25A14O95258 325 aaPredicted RBP13.88□□□□□ -0.19
CCM2-217ENST00000492883 KCNK5O95279 499 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 CEACAM1P13688 526 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 POLD2P49005 469 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 TMPRSS15P98073 1019 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 SEPT6Q14141 434 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 POU6F1Q14863 301 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 PPP1R7Q15435 360 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 PDPK2PQ6A1A2 396 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 PSAPL1Q6NUJ1 521 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 FAM151BQ6UXP7 276 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 NYAP1Q6ZVC0 841 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 KANSL1Q7Z3B3 1105 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 TRIM74Q86UV6 250 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 KLHL7Q8IXQ5 586 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 ZNF548Q8NEK5 533 aaPredicted RBP13.88□□□□□ -0.19
CCM2-217ENST00000492883 OR1E3Q8WZA6 343 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 CDC6Q99741 560 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 FRMD8Q9BZ67 464 aaPredicted RBP13.88□□□□□ -0.19
CCM2-217ENST00000492883 SUDS3Q9H7L9 328 aaPredicted RBP13.88□□□□□ -0.19
CCM2-217ENST00000492883 CARS2Q9HA77 564 aaKnown RBP13.88□□□□□ -0.19
CCM2-217ENST00000492883 FGF22Q9HCT0 170 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 IL26Q9NPH9 171 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 EIF2B3Q9NR50 452 aaKnown RBP13.88□□□□□ -0.19
CCM2-217ENST00000492883 NFKBIL1Q9UBC1 381 aaPredicted RBP13.88□□□□□ -0.19
CCM2-217ENST00000492883 PCOLCE2Q9UKZ9 415 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 CNOT6Q9ULM6 557 aaKnown RBP13.88□□□□□ -0.19
CCM2-217ENST00000492883 DOLKQ9UPQ8 538 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 KCTD3Q9Y597 815 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 DGKBQ9Y6T7 804 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 PCDH15Q96QU1 1955 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 PLXNA2O75051 1894 aa13.88□□□□□ -0.19
CCM2-217ENST00000492883 VPS13AQ96RL7 3174 aa13.87□□□□□ -0.19
CCM2-217ENST00000492883 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.87□□□□□ -0.19
CCM2-217ENST00000492883 GLYATL1P3A0A0U1RQE8 302 aa13.87□□□□□ -0.19
CCM2-217ENST00000492883 CEACAM5P06731 702 aa13.87□□□□□ -0.19
CCM2-217ENST00000492883 ANXA6P08133 673 aa13.87□□□□□ -0.19
CCM2-217ENST00000492883 ALPPL2P10696 532 aa13.87□□□□□ -0.19
CCM2-217ENST00000492883 GRIA1P42261 906 aa13.87□□□□□ -0.19
CCM2-217ENST00000492883 GNPDA1P46926 289 aa13.87□□□□□ -0.19
CCM2-217ENST00000492883 ELOCQ15369 112 aa13.87□□□□□ -0.19
CCM2-217ENST00000492883 TCEA2Q15560 299 aa13.87□□□□□ -0.19
CCM2-217ENST00000492883 TRIP6Q15654 476 aaKnown RBP13.87□□□□□ -0.19
CCM2-217ENST00000492883 CHRNA6Q15825 494 aa13.87□□□□□ -0.19
CCM2-217ENST00000492883 MARK2Q7KZI7 788 aaKnown RBP13.87□□□□□ -0.19
CCM2-217ENST00000492883 FSTL5Q8N475 847 aaPredicted RBP13.87□□□□□ -0.19
CCM2-217ENST00000492883 GDAP1Q8TB36 358 aa13.87□□□□□ -0.19
CCM2-217ENST00000492883 GLYATL1Q969I3 302 aa13.87□□□□□ -0.19
CCM2-217ENST00000492883 PDXPQ96GD0 296 aa13.87□□□□□ -0.19
CCM2-217ENST00000492883 COX14Q96I36 57 aa13.87□□□□□ -0.19
CCM2-217ENST00000492883 TBATAQ96M53 351 aa13.87□□□□□ -0.19
CCM2-217ENST00000492883 RUNDC3BQ96NL0 473 aa13.87□□□□□ -0.19
CCM2-217ENST00000492883 LRRC61Q9BV99 259 aa13.87□□□□□ -0.19
CCM2-217ENST00000492883 CASS4Q9NQ75 786 aa13.87□□□□□ -0.19
CCM2-217ENST00000492883 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.87□□□□□ -0.19
CCM2-217ENST00000492883 SUFUQ9UMX1 484 aa13.87□□□□□ -0.19
CCM2-217ENST00000492883 SLC17A4Q9Y2C5 497 aa13.87□□□□□ -0.19
CCM2-217ENST00000492883 GPSM3Q9Y4H4 160 aa13.87□□□□□ -0.19
CCM2-217ENST00000492883 CSNK1G3Q9Y6M4 447 aa13.87□□□□□ -0.19
CCM2-217ENST00000492883 GON4LQ3T8J9 2241 aa13.87□□□□□ -0.19
CCM2-217ENST00000492883 CCDC188H7C350 402 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 AP3B1O00203 1094 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 GIPC1O14908 333 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 LDB2O43679 373 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 UGT1A9O60656 530 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 CBFA2T3O75081 653 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 LDOC1O95751 146 aaPredicted RBP13.86□□□□□ -0.19
CCM2-217ENST00000492883 UGT1A6P19224 532 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 UGT1A1P22309 533 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 UGT1A4P22310 534 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 UGT1A3P35503 534 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 UGT1A5P35504 534 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 ADCY8P40145 1251 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 HADHAP40939 763 aa13.86□□□□□ -0.19
CCM2-217ENST00000492883 SARNPP82979 210 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms