RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 CLCNKAP51800 687 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 TAS2R40P59535 323 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 SEC61BP60468 96 aaKnown RBP3.91□□□□□ -1.78
VTA1-204ENST00000491881 ECT2LQ008S8 904 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 BNC1Q01954 994 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 FOXM1Q08050 763 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 HYAL1Q12794 435 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 IKQ13123 557 aaPredicted RBP3.91□□□□□ -1.78
VTA1-204ENST00000491881 ASTE1Q2TB18 679 aaPredicted RBP3.91□□□□□ -1.78
VTA1-204ENST00000491881 PAPPA-AS1Q5QFB9 102 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 FAM69BQ5VUD6 431 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 DUS1LQ6P1R4 473 aaKnown RBP3.91□□□□□ -1.78
VTA1-204ENST00000491881 TMED8Q6PL24 325 aaPredicted RBP3.91□□□□□ -1.78
VTA1-204ENST00000491881 CLEC4GQ6UXB4 293 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 CREB3L2Q70SY1 520 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 SZRD1Q7Z422 152 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 HACE1Q8IYU2 909 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 TAGAPQ8N103 731 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 TMTC2Q8N394 836 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 CLIP4Q8N3C7 705 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 C17orf53Q8N3J3 647 aaPredicted RBP3.91□□□□□ -1.78
VTA1-204ENST00000491881 RBMXL3Q8N7X1 1067 aaKnown RBP3.91□□□□□ -1.78
VTA1-204ENST00000491881 ORAI1Q96D31 301 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 CALML4Q96GE6 196 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 CCDC34Q96HJ3 373 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 THOC3Q96J01 351 aaKnown RBP3.91□□□□□ -1.78
VTA1-204ENST00000491881 ZNF479Q96JC4 524 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 PPP1R13BQ96KQ4 1090 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 C3orf30Q96M34 536 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 NUDT16L1Q9BRJ7 211 aaKnown RBP3.91□□□□□ -1.78
VTA1-204ENST00000491881 TM6SF1Q9BZW5 370 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 KCNN2Q9H2S1 579 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 PLK3Q9H4B4 646 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 MMP25Q9NPA2 562 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 SETD4Q9NVD3 440 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 OGFRQ9NZT2 677 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 OR14J1Q9UGF5 321 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 SWAP70Q9UH65 585 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 TINAGQ9UJW2 476 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 FBXW11Q9UKB1 542 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 NFS1Q9Y697 457 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 TTC3P53804 2025 aa3.9□□□□□ -1.78
VTA1-204ENST00000491881 NOTCH4Q99466 2003 aa3.9□□□□□ -1.78
VTA1-204ENST00000491881 hCG_1807616A0A1W2PRN6 198 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 KANSL1LA0AUZ9 987 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 CPED1A4D0V7 1026 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 PRSS44E7EML9 344 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 K7ENM7 598 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 SPINT2O43291 252 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 DAB1O75553 588 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 TPPPO94811 219 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 OR2C1O95371 312 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 GABRB1P18505 474 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 ANXA7P20073 488 aaKnown RBP3.9□□□□□ -1.79
VTA1-204ENST00000491881 HNRNPH2P55795 449 aaKnown RBP3.9□□□□□ -1.79
VTA1-204ENST00000491881 LTBQ06643 244 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 GRIK2Q13002 908 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 TRAF3Q13114 568 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 AIMP2Q13155 320 aaKnown RBP3.9□□□□□ -1.79
VTA1-204ENST00000491881 MYBPHQ13203 477 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 MAD2L1Q13257 205 aaPredicted RBP3.9□□□□□ -1.79
VTA1-204ENST00000491881 PCGF3Q3KNV8 242 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 DUSP28Q4G0W2 176 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 SOWAHCQ53LP3 525 aaPredicted RBP3.9□□□□□ -1.79
VTA1-204ENST00000491881 DCST1Q5T197 706 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 LRIF1Q5T3J3 769 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 FRG2Q64ET8 278 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 KIAA0930Q6ICG6 404 aaPredicted RBP3.9□□□□□ -1.79
VTA1-204ENST00000491881 JADE1Q6IE81 842 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 RGMBQ6NW40 437 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 FAM122CQ6P4D5 195 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 RHBDF2Q6PJF5 856 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 CCNI2Q6ZMN8 369 aaPredicted RBP3.9□□□□□ -1.79
VTA1-204ENST00000491881 Q6ZTC4 211 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 SPATA2LQ8IUW3 424 aaPredicted RBP3.9□□□□□ -1.79
VTA1-204ENST00000491881 FOXRED2Q8IWF2 684 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 ADHFE1Q8IWW8 467 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 PGBD5Q8N414 524 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 OR8K5Q8NH50 307 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 WFIKKN2Q8TEU8 576 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 NSUN4Q96CB9 384 aaKnown RBP3.9□□□□□ -1.79
VTA1-204ENST00000491881 SAT2Q96F10 170 aaPredicted RBP3.9□□□□□ -1.79
VTA1-204ENST00000491881 GRAMD2BQ96HH9 432 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 MED30Q96HR3 178 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 NUDCD1Q96RS6 583 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 FIZ1Q96SL8 496 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 CSF3RQ99062 836 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 PIGMQ9H3S5 423 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 STK39Q9UEW8 545 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 FBXL17Q9UF56 701 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 TMEM5Q9Y2B1 443 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 LOXL2Q9Y4K0 774 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 CLIC4Q9Y696 253 aa3.9□□□□□ -1.79
VTA1-204ENST00000491881 RSF1Q96T23 1441 aaPredicted RBP3.89□□□□□ -1.79
VTA1-204ENST00000491881 IGLV5-37A0A075B6J1 123 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 GOLGA6L9A6NEM1 432 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 EIF4E1BA6NMX2 242 aaKnown RBP3.89□□□□□ -1.79
VTA1-204ENST00000491881 AGAP14A8MT82 685 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 B4DLN1 442 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 M0QZ24 198 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms