RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 OR4C6Q8NH72 309 aa16.19■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 COX14Q96I36 57 aa16.19■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 CNDP2Q96KP4 475 aaKnown RBP16.19■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 PLEKHG4BQ96PX9 1271 aa16.19■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 NAPGQ99747 312 aaPredicted RBP16.19■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 ZSCAN5AQ9BUG6 496 aa16.19■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 SPATA16Q9BXB7 569 aa16.19■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 AP1M1Q9BXS5 423 aa16.19■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 ETNK1Q9HBU6 452 aa16.19■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 ARNT2Q9HBZ2 717 aa16.19■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 BPIFA1Q9NP55 256 aa16.19■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 MRPL40Q9NQ50 206 aaKnown RBP16.19■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 NLGN3Q9NZ94 848 aa16.19■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 SMARCAL1Q9NZC9 954 aa16.19■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 MOSPD1Q9UJG1 213 aa16.19■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 PKP3Q9Y446 797 aa16.19■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 ERI2A8K979 691 aaKnown RBP16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 TRIM38O00635 465 aa16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 ZNF185O15231 689 aa16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 TNFSF14O43557 240 aa16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 CEACAM5P06731 702 aa16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 ZSCAN5DPP0CG00 497 aa16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 GIMD1P0DJR0 217 aa16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 RPL22P35268 128 aaKnown RBP16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 LMAN1P49257 510 aa16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 C1orf61Q13536 156 aa16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 SEMA5AQ13591 1074 aa16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 TAF1AQ15573 450 aaPredicted RBP16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 N4BP2L1Q5TBK1 243 aaPredicted RBP16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 ZDHHC20Q5W0Z9 365 aa16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 PDPK2PQ6A1A2 396 aa16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 DOK6Q6PKX4 331 aa16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 C4orf22Q6V702 233 aa16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 TRIM74Q86UV6 250 aa16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 FSTL5Q8N475 847 aaPredicted RBP16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 TRAM1L1Q8N609 369 aa16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 MAGOHBQ96A72 148 aaKnown RBP16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 DUSP23Q9BVJ7 150 aa16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 CYP4F12Q9HCS2 524 aa16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 RAB6BQ9NRW1 208 aa16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 IL17CQ9P0M4 197 aa16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 SLC17A4Q9Y2C5 497 aa16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 ARL5AQ9Y689 179 aa16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 DCHS1Q96JQ0 3298 aa16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 DNAH14Q0VDD8 3507 aa16.18■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 KNL1Q8NG31 2342 aa16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 GOLGA6L10A0A0M3HER8 536 aa16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 CTAGE9A4FU28 777 aa16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 C2orf81A6NN90 581 aa16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 E7EVH7 732 aa16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 SIGLEC6O43699 453 aa16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 BUD23O43709 281 aaKnown RBP16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 PPFIA2O75334 1257 aa16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 IVLP07476 585 aa16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 CELA2BP08218 269 aaPredicted RBP16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 LPOP22079 712 aaPredicted RBP16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 SPAM1P38567 509 aa16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 MSLNQ13421 630 aaPredicted RBP16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 ELOCQ15369 112 aa16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 CYP1B1Q16678 543 aa16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 DEFB133Q30KQ1 61 aa16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 PAPD7Q5XG87 772 aaKnown RBP16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 TTC27Q6P3X3 843 aa16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 LINC00523Q86TU6 105 aa16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 C17orf53Q8N3J3 647 aaPredicted RBP16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 BRSK1Q8TDC3 778 aa16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 CLPBQ9H078 707 aa16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 CARS2Q9HA77 564 aaKnown RBP16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 CNOT6Q9ULM6 557 aaKnown RBP16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 DOLKQ9UPQ8 538 aa16.17■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 LMO7DNF2Z398 122 aa16.16■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 TPP1O14773 563 aa16.16■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 STX7O15400 261 aaKnown RBP16.16■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 SUN1O94901 812 aa16.16■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 CRTAMO95727 393 aa16.16■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 ANXA6P08133 673 aa16.16■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 FTH1P19P0C7X4 201 aa16.16■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 GNPDA1P46926 289 aa16.16■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 POLD2P49005 469 aa16.16■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 PDE1BQ01064 536 aa16.16■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 TCEA2Q15560 299 aa16.16■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 PROX2Q3B8N5 592 aa16.16■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 GKN2Q86XP6 184 aa16.16■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 SDR16C5Q8N3Y7 309 aa16.16■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 SUDS3Q9H7L9 328 aaPredicted RBP16.16■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 SUFUQ9UMX1 484 aa16.16■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 APOBEC2Q9Y235 224 aaKnown RBP16.16■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 TMEM98Q9Y2Y6 226 aa16.16■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 OAS3Q9Y6K5 1087 aaKnown RBP16.16■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 TDRD6O60522 2096 aaKnown RBP16.15■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 SPTBN4Q9H254 2564 aa16.15■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 MED19A0JLT2 244 aaPredicted RBP16.15■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 PHF2O75151 1096 aa16.15■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 ASMTLO95671 621 aa16.15■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 FUCA1P04066 466 aa16.15■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 APRTP07741 180 aa16.15■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 ADRB1P08588 477 aa16.15■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 CKMT2P17540 419 aa16.15■□□□□ 0.18
MSH5-SAPCD1-206ENST00000491552 COILP38432 576 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms