RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 NEURL2Q9BR09 285 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 B3GNT5Q9BYG0 378 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 ELOVL4Q9GZR5 314 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 MIR1-1HGQ9H1L0 117 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 INIPQ9NRY2 104 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 SNTG2Q9NY99 539 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 SPATA2Q9UM82 520 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 PCDHGB5Q9Y5G0 923 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 TCAF2A6NFQ2 919 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 VPS26AO75436 327 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 MYL3P08590 195 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 TIE1P35590 1138 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 PIGFQ07326 219 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 ELP6Q0PNE2 266 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 CAPSQ13938 189 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 NCF4Q15080 339 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 SF3B4Q15427 424 aaKnown RBP eCLIP11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 IL27RAQ6UWB1 636 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 RNF111Q6ZNA4 994 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 PRR23BQ6ZRT6 265 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 NT5DC4Q86YG4 428 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 CDYL2Q8N8U2 506 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 STAG3L4Q8TBR4 150 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 AURKBQ96GD4 344 aaPredicted RBP11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 ZNF778Q96MU6 729 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 STRA6Q9BX79 667 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 C12orf4Q9NQ89 552 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 EMCNQ9ULC0 261 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 RABL2BQ9UNT1 228 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 SLC27A5Q9Y2P5 690 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 VWA7Q9Y334 891 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 SAMHD1Q9Y3Z3 626 aaKnown RBP11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 A0A1B0GW55 424 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 WBP4O75554 376 aaKnown RBP11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 DUX4L2P0CJ85 424 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 DUX4L3P0CJ86 424 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 DUX4L4P0CJ87 422 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 DUX4L5P0CJ88 424 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 DUX4L6P0CJ89 424 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 DUX4L7P0CJ90 424 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 HOXB8P17481 243 aaPredicted RBP11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 PRKACBP22694 351 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 RFC2P35250 354 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 ATP6V1E1P36543 226 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 CLK3P49761 638 aaKnown RBP11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 CLCN3P51790 818 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 ZNF181Q2M3W8 571 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 BTBD8Q5XKL5 378 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 TIGD7Q6NT04 549 aaPredicted RBP11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 DHRS4L2Q6PKH6 230 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 LCLAT1Q6UWP7 414 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 CMTR2Q8IYT2 770 aaKnown RBP11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 REXO5Q96IC2 774 aaKnown RBP11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 PHOX2BQ99453 314 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 P2RX7Q99572 595 aaKnown RBP11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 MMP27Q9H306 513 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 SIAEQ9HAT2 523 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 HOXC10Q9NYD6 342 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 RCOR3Q9P2K3 495 aaPredicted RBP11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 DUX4Q9UBX2 424 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 A8MV72 311 aaPredicted RBP11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 TSPAN4O14817 238 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 PIP5K1BO14986 540 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 ZBTB24O43167 697 aaPredicted RBP11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 PLA2G6O60733 806 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 PRLP01236 227 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 CHRNA1P02708 482 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 CCR1P32246 355 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 PURAQ00577 322 aaKnown RBP11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 MVKQ03426 396 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 CLCQ05315 142 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 IL18R1Q13478 541 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 ZNF549Q6P9A3 640 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 ZFP90Q8TF47 636 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 STYXQ8WUJ0 223 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 PRMT6Q96LA8 375 aaPredicted RBP11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 PEBP4Q96S96 227 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 CDK5RAP1Q96SZ6 601 aaKnown RBP11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 ACOX2Q99424 681 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 TRIM62Q9BVG3 475 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 TRIM45Q9H8W5 580 aaPredicted RBP11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 ADPRHL2Q9NX46 363 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 PAQR5Q9NXK6 330 aaPredicted RBP11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 FAM198AQ9UFP1 575 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 PARP4Q9UKK3 1724 aaKnown RBP11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 CILPO75339 1184 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 TSPAN19P0C672 248 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 MED22Q15528 200 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 ATP6AP1Q15904 470 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 PYDC2Q56P42 97 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 SNX29P2Q8IUI4 249 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 DENND6AQ8IWF6 608 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 CERS5Q8N5B7 392 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 PQLC3Q8N755 202 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 BIRC7Q96CA5 298 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 LRRC3Q9BY71 257 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 EXD2Q9NVH0 621 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 ING4Q9UNL4 249 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 TESMINQ9Y4I5 508 aa11.25□□□□□ -0.61
CRNKL1-204ENST00000490910 OR6C70A6NIJ9 312 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms