RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 FAM117AQ9C073 453 aa15.46■□□□□ 0.07
COL2A1-207ENST00000490609 NT5MQ9NPB1 228 aa15.46■□□□□ 0.07
COL2A1-207ENST00000490609 PILRAQ9UKJ1 303 aa15.46■□□□□ 0.07
COL2A1-207ENST00000490609 A0A1B0GTH6 734 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 A6NCN8 305 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 DESP17661 470 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 GPR1P46091 355 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 STC1P52823 247 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 CDH6P55285 790 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 DSC2Q02487 901 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 NIPAL4Q0D2K0 466 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 NR1I3Q14994 352 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 ANO6Q4KMQ2 910 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 TMEM71Q6P5X7 295 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 MARK2Q7KZI7 788 aaKnown RBP15.45■□□□□ 0.06
COL2A1-207ENST00000490609 ZNF765Q7L2R6 523 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 TIPARPQ7Z3E1 657 aaKnown RBP15.45■□□□□ 0.06
COL2A1-207ENST00000490609 PAF1Q8N7H5 531 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 TEKT4Q8WW24 435 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 AP2M1Q96CW1 435 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 EID2BQ96D98 161 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 OR2M4Q96R27 311 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 ARHGAP9Q9BRR9 750 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 DDA1Q9BW61 102 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 THAP2Q9H0W7 228 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 CDH19Q9H159 772 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 TMEM63CQ9P1W3 806 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 PRKAB1Q9Y478 270 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 PCDHB11Q9Y5F2 797 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 SCINQ9Y6U3 715 aa15.45■□□□□ 0.06
COL2A1-207ENST00000490609 GOLGA6CA6NDK9 693 aa15.44■□□□□ 0.06
COL2A1-207ENST00000490609 GOLGA6BA6NDN3 693 aa15.44■□□□□ 0.06
COL2A1-207ENST00000490609 B4E171 279 aa15.44■□□□□ 0.06
COL2A1-207ENST00000490609 MFSD11O43934 449 aa15.44■□□□□ 0.06
COL2A1-207ENST00000490609 CLDN7O95471 211 aa15.44■□□□□ 0.06
COL2A1-207ENST00000490609 ATP1A1P05023 1023 aaKnown RBP15.44■□□□□ 0.06
COL2A1-207ENST00000490609 MMP2P08253 660 aa15.44■□□□□ 0.06
COL2A1-207ENST00000490609 GOLGA6DP0CG33 693 aa15.44■□□□□ 0.06
COL2A1-207ENST00000490609 ARL4AP40617 200 aa15.44■□□□□ 0.06
COL2A1-207ENST00000490609 TSPAN7P41732 249 aa15.44■□□□□ 0.06
COL2A1-207ENST00000490609 SRSF1Q07955 248 aaKnown RBP eCLIP15.44■□□□□ 0.06
COL2A1-207ENST00000490609 KLHL30Q0D2K2 578 aa15.44■□□□□ 0.06
COL2A1-207ENST00000490609 GALNT2Q10471 571 aa15.44■□□□□ 0.06
COL2A1-207ENST00000490609 SLC10A2Q12908 348 aaPredicted RBP15.44■□□□□ 0.06
COL2A1-207ENST00000490609 ANKS6Q68DC2 871 aa15.44■□□□□ 0.06
COL2A1-207ENST00000490609 NCBP2-AS2Q69YL0 99 aa15.44■□□□□ 0.06
COL2A1-207ENST00000490609 ATPAF2Q8N5M1 289 aa15.44■□□□□ 0.06
COL2A1-207ENST00000490609 AGBL5Q8NDL9 886 aa15.44■□□□□ 0.06
COL2A1-207ENST00000490609 BPIFA3Q9BQP9 254 aa15.44■□□□□ 0.06
COL2A1-207ENST00000490609 RIOK2Q9BVS4 552 aaKnown RBP15.44■□□□□ 0.06
COL2A1-207ENST00000490609 SLC25A18Q9H1K4 315 aa15.44■□□□□ 0.06
COL2A1-207ENST00000490609 SLC39A1Q9NY26 324 aa15.44■□□□□ 0.06
COL2A1-207ENST00000490609 GOLGA6AQ9NYA3 693 aa15.44■□□□□ 0.06
COL2A1-207ENST00000490609 KCNK4Q9NYG8 393 aa15.44■□□□□ 0.06
COL2A1-207ENST00000490609 TBC1D29Q9UFV1 150 aa15.44■□□□□ 0.06
COL2A1-207ENST00000490609 CHKBQ9Y259 395 aa15.44■□□□□ 0.06
COL2A1-207ENST00000490609 SPTAN1Q13813 2472 aaKnown RBP15.44■□□□□ 0.06
COL2A1-207ENST00000490609 MED13Q9UHV7 2174 aa15.43■□□□□ 0.06
COL2A1-207ENST00000490609 EFCAB7A8K855 629 aa15.43■□□□□ 0.06
COL2A1-207ENST00000490609 FADS2P1A8MWK0 482 aa15.43■□□□□ 0.06
COL2A1-207ENST00000490609 INPP4BO15327 924 aa15.43■□□□□ 0.06
COL2A1-207ENST00000490609 NKX2-8O15522 239 aa15.43■□□□□ 0.06
COL2A1-207ENST00000490609 MAP3K6O95382 1288 aa15.43■□□□□ 0.06
COL2A1-207ENST00000490609 MYBL1P10243 752 aa15.43■□□□□ 0.06
COL2A1-207ENST00000490609 PBX1P40424 430 aa15.43■□□□□ 0.06
COL2A1-207ENST00000490609 GARSP41250 739 aaKnown RBP15.43■□□□□ 0.06
COL2A1-207ENST00000490609 DPYSL3Q14195 570 aa15.43■□□□□ 0.06
COL2A1-207ENST00000490609 PIGHQ14442 188 aaPredicted RBP15.43■□□□□ 0.06
COL2A1-207ENST00000490609 PAFAH1B3Q15102 231 aaKnown RBP15.43■□□□□ 0.06
COL2A1-207ENST00000490609 COLEC12Q5KU26 742 aa15.43■□□□□ 0.06
COL2A1-207ENST00000490609 TMEM164Q5U3C3 297 aa15.43■□□□□ 0.06
COL2A1-207ENST00000490609 IYDQ6PHW0 289 aa15.43■□□□□ 0.06
COL2A1-207ENST00000490609 ATG14Q6ZNE5 492 aa15.43■□□□□ 0.06
COL2A1-207ENST00000490609 USP45Q70EL2 814 aa15.43■□□□□ 0.06
COL2A1-207ENST00000490609 ZSCAN1Q8NBB4 408 aa15.43■□□□□ 0.06
COL2A1-207ENST00000490609 RTP4Q96DX8 246 aa15.43■□□□□ 0.06
COL2A1-207ENST00000490609 TDRD1Q9BXT4 1180 aaKnown RBP15.43■□□□□ 0.06
COL2A1-207ENST00000490609 MRPL47Q9HD33 250 aaKnown RBP15.43■□□□□ 0.06
COL2A1-207ENST00000490609 APMAPQ9HDC9 416 aa15.43■□□□□ 0.06
COL2A1-207ENST00000490609 NENFQ9UMX5 172 aa15.43■□□□□ 0.06
COL2A1-207ENST00000490609 HEMK1Q9Y5R4 338 aaPredicted RBP15.43■□□□□ 0.06
COL2A1-207ENST00000490609 LOC101059948A0A1B0GTJ6 334 aa15.42■□□□□ 0.06
COL2A1-207ENST00000490609 MATN3O15232 486 aa15.42■□□□□ 0.06
COL2A1-207ENST00000490609 DUX1O43812 170 aa15.42■□□□□ 0.06
COL2A1-207ENST00000490609 RAD1O60671 282 aa15.42■□□□□ 0.06
COL2A1-207ENST00000490609 CYP1A2P05177 515 aa15.42■□□□□ 0.06
COL2A1-207ENST00000490609 GPLD1P80108 840 aa15.42■□□□□ 0.06
COL2A1-207ENST00000490609 MC2RQ01718 297 aa15.42■□□□□ 0.06
COL2A1-207ENST00000490609 IQCB1Q15051 598 aa15.42■□□□□ 0.06
COL2A1-207ENST00000490609 CCDC183Q5T5S1 534 aa15.42■□□□□ 0.06
COL2A1-207ENST00000490609 HENMT1Q5T8I9 393 aaKnown RBP15.42■□□□□ 0.06
COL2A1-207ENST00000490609 WDR74Q6RFH5 385 aaPredicted RBP15.42■□□□□ 0.06
COL2A1-207ENST00000490609 NRSN1Q8IZ57 195 aa15.42■□□□□ 0.06
COL2A1-207ENST00000490609 CACNA2D3Q8IZS8 1091 aa15.42■□□□□ 0.06
COL2A1-207ENST00000490609 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.42■□□□□ 0.06
COL2A1-207ENST00000490609 PQLC3Q8N755 202 aa15.42■□□□□ 0.06
COL2A1-207ENST00000490609 EXD1Q8NHP7 514 aa15.42■□□□□ 0.06
COL2A1-207ENST00000490609 TSGA13Q96PP4 275 aa15.42■□□□□ 0.06
COL2A1-207ENST00000490609 LYSMD1Q96S90 227 aa15.42■□□□□ 0.06
COL2A1-207ENST00000490609 CTRCQ99895 268 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms