RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 TXNDC5Q8NBS9 432 aaKnown RBP2.98□□□□□ -1.93
UBXN4-208ENST00000490163 DACT3Q96B18 629 aaPredicted RBP2.98□□□□□ -1.93
UBXN4-208ENST00000490163 CNOT6LQ96LI5 555 aaKnown RBP2.98□□□□□ -1.93
UBXN4-208ENST00000490163 RMDN2Q96LZ7 410 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 GFI1Q99684 422 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 PKP2Q99959 881 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 MGME1Q9BQP7 344 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 C17orf80Q9BSJ5 609 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 ESRP2Q9H6T0 727 aaKnown RBP2.98□□□□□ -1.93
UBXN4-208ENST00000490163 LRRC4CQ9HCJ2 640 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 MRPL17Q9NRX2 175 aaKnown RBP2.98□□□□□ -1.93
UBXN4-208ENST00000490163 SETD4Q9NVD3 440 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 FAM153AQ9UHL3 310 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 ADAM21Q9UKJ8 722 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 ACSL5Q9ULC5 683 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 U3KQV3 271 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 COL18A1P39060 1754 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 SCAF11Q99590 1463 aaKnown RBP2.98□□□□□ -1.93
UBXN4-208ENST00000490163 FAM135BQ49AJ0 1406 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 NCOA3Q9Y6Q9 1424 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 ZNF263O14978 683 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 KERAO60938 352 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 SKILP12757 684 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 MAPK3P27361 379 aaPredicted RBP2.98□□□□□ -1.93
UBXN4-208ENST00000490163 CXCR3P49682 368 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 ARSEP51690 589 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 GAB1Q13480 694 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 HS1BP3Q53T59 392 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 CTR9Q6PD62 1173 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 TMEM270Q6UE05 265 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 PET117Q6UWS5 81 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 ATG9AQ7Z3C6 839 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 LCA5Q86VQ0 697 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 RASAL3Q86YV0 1011 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 PDCL2Q8N4E4 241 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 ZCCHC9Q8N567 271 aaKnown RBP2.98□□□□□ -1.93
UBXN4-208ENST00000490163 FLCNQ8NFG4 579 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 SETD6Q8TBK2 473 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 ADAMTS17Q8TE56 1095 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 GIMAP5Q96F15 307 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 SLC41A3Q96GZ6 507 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 VPS50Q96JG6 964 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 PCDHB18PQ96TA0 734 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 HRH4Q9H3N8 390 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 CHMP5Q9NZZ3 219 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 DNPEPQ9ULA0 475 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 ASB3Q9Y575 518 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 SHANK3Q9BYB0 1731 aa2.98□□□□□ -1.93
UBXN4-208ENST00000490163 KANK1Q14678 1352 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 NINLQ9Y2I6 1382 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 A0A1B0GTW7 788 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 SNX4O95219 450 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 VNN2O95498 520 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 HLA-DQA2P01906 255 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 ABCB1P08183 1280 aaPredicted RBP2.97□□□□□ -1.93
UBXN4-208ENST00000490163 C8orf89P0DMQ9 161 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 APEHP13798 732 aaKnown RBP2.97□□□□□ -1.93
UBXN4-208ENST00000490163 CYP3A5P20815 502 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 RFC2P35250 354 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 IDUAP35475 653 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 RGS19P49795 217 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 KCNQ1P51787 676 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 SATB1Q01826 763 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 NPRL3Q12980 569 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 HIST2H2ACQ16777 129 aaPredicted RBP2.97□□□□□ -1.93
UBXN4-208ENST00000490163 SERTAD4-AS1Q5TG53 156 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 METAP1DQ6UB28 335 aaPredicted RBP2.97□□□□□ -1.93
UBXN4-208ENST00000490163 ZYG11AQ6WRX3 759 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 PLEKHM3Q6ZWE6 761 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 CAMKMTQ7Z624 323 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 TRIM74Q86UV6 250 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 TRIM73Q86UV7 250 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 CPXM2Q8N436 756 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 C12orf76Q8N812 135 aaPredicted RBP2.97□□□□□ -1.93
UBXN4-208ENST00000490163 SLC20A1Q8WUM9 679 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 RAB7BQ96AH8 199 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 ZBTB9Q96C00 473 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 PABPC5Q96DU9 382 aaKnown RBP2.97□□□□□ -1.93
UBXN4-208ENST00000490163 CCDC106Q9BWC9 280 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 APOL6Q9BWW8 343 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 KCNMB3Q9NPA1 279 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 SH3BGRL2Q9UJC5 107 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 TNRQ92752 1358 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 ADGRA2Q96PE1 1338 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 ZSCAN9O15535 394 aaPredicted RBP2.97□□□□□ -1.93
UBXN4-208ENST00000490163 GGPS1O95749 300 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 ALDOAP04075 364 aaKnown RBP2.97□□□□□ -1.93
UBXN4-208ENST00000490163 C8AP07357 584 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 WEE2P0C1S8 567 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 SAT1P21673 171 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 SDHBP21912 280 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 CD96P40200 585 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 DIO1P49895 249 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 CLCNKAP51800 687 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 OAZ1P54368 228 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 C21orf58P58505 322 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 RPS7P62081 194 aaKnown RBP2.97□□□□□ -1.93
UBXN4-208ENST00000490163 ARF5P84085 180 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 SRSF1Q07955 248 aaKnown RBP eCLIP2.97□□□□□ -1.935e-7■□□□□ 9.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms