RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 CLDN7O95471 211 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 RPLP0P05388 317 aaKnown RBP9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 ZFXP17010 805 aaPredicted RBP9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 RBMS1P29558 406 aaKnown RBP9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 CDKN2BP42772 138 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 GPR3P46089 330 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 GPR1P46091 355 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 NR2C2P49116 596 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 SPINT3P49223 89 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 INHBCP55103 352 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 CTBSQ01459 385 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 ITKQ08881 620 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 CCDC173Q0VFZ6 552 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 ILF3Q12906 894 aaKnown RBP eCLIP9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 PDK1Q15118 436 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 TCEA2Q15560 299 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 C3orf38Q5JPI3 329 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 RAET1GQ6H3X3 334 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 PCSK4Q6UW60 755 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 GPR155Q7Z3F1 870 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 TMPRSS9Q7Z410 1059 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 NAGSQ8N159 534 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 ARL14Q8N4G2 192 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 TC2NQ8N9U0 490 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 KIAA1524Q8TCG1 905 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 RIOK2Q9BVS4 552 aaKnown RBP9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 DPEP2Q9H4A9 486 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 DEF6Q9H4E7 631 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 MAGEE1Q9HCI5 957 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 VPS18Q9P253 973 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 PDP2Q9P2J9 529 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 NFKBIL1Q9UBC1 381 aaPredicted RBP9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 LOC400499M0QZD8 3231 aa9.67□□□□□ -0.86
TMEM39A-210ENST00000490099 TEX51A0A1B0GUA7 166 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 A6NCN8 305 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 AKR1B15C9JRZ8 316 aaPredicted RBP9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 APOL1O14791 398 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 NVLO15381 856 aaKnown RBP9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 DNAJC6O75061 913 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 ECEL1O95672 775 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 TPM1P09493 284 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 COMTP21964 271 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 CA4P22748 312 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 FECHP22830 423 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 AK4P27144 223 aaPredicted RBP9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 CD1CP29017 333 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 UGT1A5P35504 534 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 GJC1P36383 396 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 CD86P42081 329 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 GNPDA1P46926 289 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 FASLGP48023 281 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 UCNP55089 124 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 PEX6Q13608 980 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 LRP8Q14114 963 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 PRKD1Q15139 912 aaPredicted RBP9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 DENND2CQ68D51 928 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 MFSD7Q6UXD7 560 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 ZNF574Q6ZN55 896 aaPredicted RBP9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 RAB11FIP2Q7L804 512 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 TMC3Q7Z5M5 1100 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 RHOT1Q8IXI2 618 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 RNF214Q8ND24 703 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 CCNYQ8ND76 341 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 ZDHHC1Q8WTX9 485 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 KCNE4Q8WWG9 221 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 CCDC97Q96F63 343 aaPredicted RBP9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 WBP1Q96G27 269 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 TEKT5Q96M29 485 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 FCRL3Q96P31 734 aaPredicted RBP9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 OR2M4Q96R27 311 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 MLPHQ9BV36 600 aaPredicted RBP9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 ADGRE3Q9BY15 652 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 FOXP3Q9BZS1 431 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 STRADBQ9C0K7 418 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 CDH19Q9H159 772 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 SLC25A51Q9H1U9 297 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 FAM83DQ9H4H8 585 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 RMI1Q9H9A7 625 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 DDX56Q9NY93 547 aaKnown RBP9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 TMEM98Q9Y2Y6 226 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 HEY1Q9Y5J3 304 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 PCYT1BQ9Y5K3 369 aaPredicted RBP9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 ADGRG1Q9Y653 693 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 ALG6Q9Y672 507 aa9.66□□□□□ -0.86
TMEM39A-210ENST00000490099 A0A0A6YYK5 440 aaPredicted RBP9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 PRR19A6NJB7 356 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 FADS2P1A8MWK0 482 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 B4DGG1 531 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 PPM1DO15297 605 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 EFSO43281 561 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 CPNE6O95741 557 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 EPOP01588 193 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 EPHB1P54762 984 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 MAZP56270 477 aaKnown RBP9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 PRSS12P56730 875 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 DCDC1P59894 354 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 CFHR1Q03591 330 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 ADCY2Q08462 1091 aa9.65□□□□□ -0.86
TMEM39A-210ENST00000490099 WASHC5Q12768 1159 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms