RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 AP3D1O14617 1153 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 RPP40O75818 363 aaKnown RBP17.56■□□□□ 0.4
NPHP4-209ENST00000489180 CTSEP14091 401 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 MAPK8P45983 427 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 ITGA7Q13683 1181 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 ZYG11AQ6WRX3 759 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 TDRD1Q9BXT4 1180 aaKnown RBP17.56■□□□□ 0.4
NPHP4-209ENST00000489180 CCNB1IP1Q9NPC3 277 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 RAB23Q9ULC3 237 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 UBE2QL1A1L167 161 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 SLC25A14O95258 325 aaPredicted RBP17.56■□□□□ 0.4
NPHP4-209ENST00000489180 TRBC1P01850 177 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 CRYBB1P53674 252 aaPredicted RBP17.56■□□□□ 0.4
NPHP4-209ENST00000489180 TAS2R41P59536 307 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 LGALS3BPQ08380 585 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 EGFLAMQ63HQ2 1017 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 SPATA22Q8NHS9 363 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 SLC9A7Q96T83 725 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 ABCB9Q9NP78 766 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 TRNAU1APQ9NX07 287 aaKnown RBP17.56■□□□□ 0.4
NPHP4-209ENST00000489180 CBFA2T3O75081 653 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 C15orf52Q6ZUT6 534 aaKnown RBP17.56■□□□□ 0.4
NPHP4-209ENST00000489180 ZNF655Q8N720 491 aaPredicted RBP17.56■□□□□ 0.4
NPHP4-209ENST00000489180 MYO19Q96H55 970 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 MCMBPQ9BTE3 642 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 WDR12Q9GZL7 423 aaKnown RBP17.56■□□□□ 0.4
NPHP4-209ENST00000489180 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.56■□□□□ 0.4
NPHP4-209ENST00000489180 ASF1AQ9Y294 204 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 WBP11Q9Y2W2 641 aaKnown RBP17.56■□□□□ 0.4
NPHP4-209ENST00000489180 IQCF5A8MTL0 148 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 SERPINA1P01009 418 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 PRKAR1AP10644 381 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 NCK1P16333 377 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 RPL3P39023 403 aaKnown RBP17.55■□□□□ 0.4
NPHP4-209ENST00000489180 CPTPQ5TA50 214 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 PAOXQ6QHF9 649 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 C1QTNF7Q9BXJ2 289 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 EURLQ9NYK6 297 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 KCNE2Q9Y6J6 123 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 WASF2Q9Y6W5 498 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 UGT2B11O75310 529 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 SPATA31D3P0C874 917 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 IGFBP5P24593 272 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 RPL9P32969 192 aaKnown RBP17.55■□□□□ 0.4
NPHP4-209ENST00000489180 CCL23P55773 120 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 LSM12Q3MHD2 195 aaKnown RBP17.55■□□□□ 0.4
NPHP4-209ENST00000489180 GALNT18Q6P9A2 607 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 SPATA31D4Q6ZUB0 917 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 SLC26A9Q7LBE3 791 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 GPR142Q7Z601 462 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 CSGALNACT1Q8TDX6 532 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 NAT14Q8WUY8 206 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 DPF3Q92784 378 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 RAB26Q9ULW5 256 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 ARHGAP23Q9P227 1491 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 ISM1B1AKI9 464 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 BCKDKO14874 412 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 SERPINB7O75635 380 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 GDF10P55107 478 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 MANFP55145 182 aaKnown RBP17.55■□□□□ 0.4
NPHP4-209ENST00000489180 IKBKEQ14164 716 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 SIX5Q8N196 739 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 CBR4Q8N4T8 237 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 TLCD1Q96CP7 247 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 CXorf40BQ96DE9 158 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 PLK2Q9NYY3 685 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 COMMD9Q9P000 198 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 SAMD4AQ9UPU9 718 aaKnown RBP17.55■□□□□ 0.4
NPHP4-209ENST00000489180 SNX10Q9Y5X0 201 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 CASKO14936 926 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 IDH3AP50213 366 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 RABGGTBP53611 331 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 LIPEQ05469 1076 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 LIN52Q52LA3 116 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 BRMS1LQ5PSV4 323 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 DCLRE1AQ6PJP8 1040 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 SERPINA13PQ6UXR4 307 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 PIK3C3Q8NEB9 887 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 ZNF607Q96SK3 696 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 GPR21Q99679 349 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 ASAH2Q9NR71 780 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 ARHGEF28Q8N1W1 1705 aaKnown RBP17.55■□□□□ 0.4
NPHP4-209ENST00000489180 C9P02748 559 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 CSH1P0DML2 217 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 CSH2P0DML3 217 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 CCNHP51946 323 aaPredicted RBP17.55■□□□□ 0.4
NPHP4-209ENST00000489180 HSDL1Q3SXM5 330 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 BHLHB9Q6PI77 547 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 AGMOQ6ZNB7 445 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 CXXC5Q7LFL8 322 aaKnown RBP17.55■□□□□ 0.4
NPHP4-209ENST00000489180 SATL1Q86VE3 508 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 PGAM4Q8N0Y7 254 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 NAT16Q8N8M0 369 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 TRMOQ9BU70 441 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 SDCBP2Q9H190 292 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 DPEP3Q9H4B8 488 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 LRTM1Q9HBL6 345 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 MKL2Q9ULH7 1088 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 ING4Q9UNL4 249 aa17.55■□□□□ 0.4
NPHP4-209ENST00000489180 NMBRP28336 390 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms