RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 ADARB1P78563 741 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 RAD51Q06609 339 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 BFSP2Q13515 415 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 KRR1Q13601 381 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 BMPR2Q13873 1038 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 VPS72Q15906 364 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 HIST2H2ACQ16777 129 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 SMU1Q2TAY7 513 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 ANO4Q32M45 955 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 SLC9B1Q4ZJI4 515 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 CYBRD1Q53TN4 286 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 YIF1BQ5BJH7 314 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 BRMS1LQ5PSV4 323 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 N4BP2L1Q5TBK1 243 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 VWA5B1Q5TIE3 1220 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 UBE2UQ5VVX9 321 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 RSBN1Q5VWQ0 802 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 TATDN1Q6P1N9 297 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 FAM122CQ6P4D5 195 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 HACD2Q6Y1H2 254 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 FKBP9P1Q75LS8 142 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 OTOP3Q7RTS5 596 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 CDR2LQ86X02 465 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 LYSMD2Q8IV50 215 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 TP53INP2Q8IXH6 220 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 UNC5BQ8IZJ1 945 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 CBR4Q8N4T8 237 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 KIAA1958Q8N8K9 716 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 NIPA2Q8N8Q9 360 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 LEMD2Q8NC56 503 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 AGBL5Q8NDL9 886 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 BEST2Q8NFU1 509 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 SYTL5Q8TDW5 730 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 JPH3Q8WXH2 748 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 MUL1Q969V5 352 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 LENG9Q96B70 501 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 MAP6Q96JE9 813 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 MFSD14AQ96MC6 490 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 FAM20AQ96MK3 541 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZNF560Q96MR9 790 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 OR52B2Q96RD2 323 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 IL12RB2Q99665 862 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 COQ7Q99807 217 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 SH2D3AQ9BRG2 576 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 MTMR12Q9C0I1 747 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 LHPPQ9H008 270 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 SEMA6AQ9H2E6 1030 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 BCAS3Q9H6U6 928 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 NOL11Q9H8H0 719 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 PRDM5Q9NQX1 630 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 SMYD2Q9NRG4 433 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 AGPAT4Q9NRZ5 378 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 CCM2LQ9NUG4 571 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 PAK1IP1Q9NWT1 392 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 TXNDC16Q9P2K2 825 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 TNFRSF10DQ9UBN6 386 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 CD300AQ9UGN4 299 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 TRMT112Q9UI30 125 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZNF639Q9UID6 485 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZNF229Q9UJW7 825 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 VAV3Q9UKW4 847 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZBTB21Q9ULJ3 1066 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 PCDHGA7Q9Y5G6 932 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 GREB1LQ9C091 1923 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 TRBV23-1A0A0A0MS06 115 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 HEATR9A2RTY3 570 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 AQP12BA6NM10 295 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 WASH4PA8MWX3 477 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 ERVV-1B6SEH8 477 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 hCG_2039718K7EN88 272 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 AGRPO00253 132 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 DLX3O60479 287 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 PPP1R11O60927 126 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 PRAMEF1O95521 474 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 NDST3O95803 873 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 F13BP05160 661 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 ENO3P13929 434 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 FOSL1P15407 271 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 TCN1P20061 433 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 HSPA1LP34931 641 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 SERPINB5P36952 375 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 MAGEA12P43365 314 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 GCLMP48507 274 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 MASP1P48740 699 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 ALDH7A1P49419 539 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZNF132P52740 706 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 NDST1P52848 882 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 NOMO3P69849 1222 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 CHRNDQ07001 517 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 FOXD4Q12950 439 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 TCEA2Q15560 299 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 RBM48Q5RL73 367 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 LDLRAP1Q5SW96 308 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 ATAD3CQ5T2N8 411 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 SFRP5Q5T4F7 317 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZNF544Q6NX49 715 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 C8orf82Q6P1X6 216 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 NEK5Q6P3R8 708 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 FAM171BQ6P995 826 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 CRTC3Q6UUV7 619 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms