RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 KLK10O43240 276 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 ANP32CO43423 234 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 NBNO60934 754 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 DDX58O95786 925 aaKnown RBP2.07□□□□□ -2.08
USP9X-208ENST00000487625 KRTAP1-4P0C5Y4 121 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 AGAP20933 346 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 MAOAP21397 527 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 EFNA5P52803 228 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 DRG2P55039 364 aaKnown RBP2.07□□□□□ -2.08
USP9X-208ENST00000487625 HNRNPH2P55795 449 aaKnown RBP2.07□□□□□ -2.08
USP9X-208ENST00000487625 ISL1P61371 349 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 PPFIA1Q13136 1202 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 BIRC3Q13489 604 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 NAA25Q14CX7 972 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 PDCD2Q16342 344 aaPredicted RBP2.07□□□□□ -2.08
USP9X-208ENST00000487625 CCDC184Q52MB2 194 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 SIRPB2Q5JXA9 342 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 WDR45BQ5MNZ6 344 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 GPATCH4Q5T3I0 446 aaKnown RBP2.07□□□□□ -2.08
USP9X-208ENST00000487625 FBXO46Q6PJ61 603 aaPredicted RBP2.07□□□□□ -2.08
USP9X-208ENST00000487625 CEACAM20Q6UY09 585 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 ASB18Q6ZVZ8 466 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 RSRC2Q7L4I2 434 aaKnown RBP2.07□□□□□ -2.08
USP9X-208ENST00000487625 GPAT4Q86UL3 456 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 MOGAT3Q86VF5 341 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 MYLK4Q86YV6 388 aaPredicted RBP2.07□□□□□ -2.08
USP9X-208ENST00000487625 RNF113BQ8IZP6 322 aaKnown RBP2.07□□□□□ -2.08
USP9X-208ENST00000487625 SRBD1Q8N5C6 995 aaKnown RBP2.07□□□□□ -2.08
USP9X-208ENST00000487625 CNBD1Q8NA66 436 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 ZNF248Q8NDW4 579 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 VPS37AQ8NEZ2 397 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 MAGEC3Q8TD91 643 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 SH3KBP1Q96B97 665 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 FBXL8Q96CD0 374 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 LTV1Q96GA3 475 aaPredicted RBP2.07□□□□□ -2.08
USP9X-208ENST00000487625 SIN3AQ96ST3 1273 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 FSD1Q9BTV5 496 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 MMP25Q9NPA2 562 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 KIF17Q9P2E2 1029 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 RCOR1Q9UKL0 485 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 CARD8Q9Y2G2 431 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 DLGAP4Q9Y2H0 992 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 TTLL3Q9Y4R7 772 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 RPGRIP1LQ68CZ1 1315 aa2.07□□□□□ -2.08
USP9X-208ENST00000487625 hCG_1642624A0A1W2PR95 340 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 IFNL4K9M1U5 179 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 MMP2P08253 660 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 CNPP09543 421 aaKnown RBP2.06□□□□□ -2.08
USP9X-208ENST00000487625 CAPN3P20807 821 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 CALRP27797 417 aaKnown RBP2.06□□□□□ -2.08
USP9X-208ENST00000487625 GNL1P36915 607 aaPredicted RBP2.06□□□□□ -2.08
USP9X-208ENST00000487625 DCTP40126 519 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 GNB1P62873 340 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 MPP1Q00013 466 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 PRKG2Q13237 762 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 EFR3AQ14156 821 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 CDC37Q16543 378 aaPredicted RBP2.06□□□□□ -2.08
USP9X-208ENST00000487625 PDSS1Q5T2R2 415 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 SERTAD4-AS1Q5TG53 156 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 SPATA1Q5VX52 437 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 SLC35E4Q6ICL7 350 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 TRNP1Q6NT89 227 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 SUGP1Q8IWZ8 645 aaKnown RBP2.06□□□□□ -2.08
USP9X-208ENST00000487625 DHX40Q8IX18 779 aaKnown RBP2.06□□□□□ -2.08
USP9X-208ENST00000487625 PLD5Q8N7P1 536 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 LSM14AQ8ND56 463 aaKnown RBP2.06□□□□□ -2.08
USP9X-208ENST00000487625 CADM4Q8NFZ8 388 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 TRAPPC12Q8WVT3 735 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 ZNF689Q96CS4 500 aaPredicted RBP2.06□□□□□ -2.08
USP9X-208ENST00000487625 ZNF354BQ96LW1 612 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 ZNF570Q96NI8 536 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 EYA3Q99504 573 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 CMKLR1Q99788 373 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 SYT17Q9BSW7 474 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 POLR3CQ9BUI4 534 aaPredicted RBP2.06□□□□□ -2.08
USP9X-208ENST00000487625 TMX4Q9H1E5 349 aaPredicted RBP2.06□□□□□ -2.08
USP9X-208ENST00000487625 BABAM1Q9NWV8 329 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 KIAA1456Q9P272 454 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 ZNF624Q9P2J8 865 aaPredicted RBP2.06□□□□□ -2.08
USP9X-208ENST00000487625 PEMTQ9UBM1 199 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 SUFUQ9UMX1 484 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 NOL7Q9UMY1 257 aaKnown RBP2.06□□□□□ -2.08
USP9X-208ENST00000487625 RABGAP1Q9Y3P9 1069 aa2.06□□□□□ -2.08
USP9X-208ENST00000487625 A0A1W2PRQ8 180 aa2.05□□□□□ -2.08
USP9X-208ENST00000487625 CTAGE9A4FU28 777 aa2.05□□□□□ -2.08
USP9X-208ENST00000487625 GOLGA6L9A6NEM1 432 aa2.05□□□□□ -2.08
USP9X-208ENST00000487625 TMEM202A6NGA9 273 aa2.05□□□□□ -2.08
USP9X-208ENST00000487625 BLOC1S5-TXNDC5H3BN57 136 aa2.05□□□□□ -2.08
USP9X-208ENST00000487625 NCAM2O15394 837 aa2.05□□□□□ -2.08
USP9X-208ENST00000487625 WDR1O75083 606 aa2.05□□□□□ -2.08
USP9X-208ENST00000487625 BAIAP3O94812 1187 aa2.05□□□□□ -2.08
USP9X-208ENST00000487625 HEXAP06865 529 aa2.05□□□□□ -2.08
USP9X-208ENST00000487625 INHBAP08476 426 aa2.05□□□□□ -2.08
USP9X-208ENST00000487625 CTAGE8P0CG41 777 aa2.05□□□□□ -2.08
USP9X-208ENST00000487625 CHKAP35790 457 aa2.05□□□□□ -2.08
USP9X-208ENST00000487625 HOXA1P49639 335 aaPredicted RBP2.05□□□□□ -2.08
USP9X-208ENST00000487625 ARL4CP56559 192 aa2.05□□□□□ -2.08
USP9X-208ENST00000487625 TBL3Q12788 808 aaKnown RBP2.05□□□□□ -2.08
USP9X-208ENST00000487625 GTF2H2Q13888 395 aa2.05□□□□□ -2.08
USP9X-208ENST00000487625 PRKG1Q13976 671 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms