RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 AKT2P31751 481 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 HNF1BP35680 557 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 CHRNA4P43681 627 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 RABIFP47224 123 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 LIG3P49916 1009 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 CCT8P50990 548 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 PDX1P52945 283 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 DYNLT1P63172 113 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 BNIP3Q12983 259 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 MTM1Q13496 603 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 STAT4Q14765 748 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 KHDC1Q4VXA5 237 aaKnown RBP5.72□□□□□ -1.49
CUX1-208ENST00000485792 SLC45A4Q5BKX6 768 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 ZNF542PQ5EBM4 170 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 PSAPL1Q6NUJ1 521 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 KDELC1Q6UW63 502 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 Q6ZSR6 202 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 BZW1Q7L1Q6 419 aaKnown RBP5.72□□□□□ -1.49
CUX1-208ENST00000485792 ZNF765Q7L2R6 523 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 HSD11B1LQ7Z5J1 315 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 BTLAQ7Z6A9 289 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 DAAM2Q86T65 1068 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 SLCO6A1Q86UG4 719 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 NAXDQ8IW45 347 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 SDR16C5Q8N3Y7 309 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 PNPLA1Q8N8W4 532 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 CCDC112Q8NEF3 446 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 SPATA22Q8NHS9 363 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 SLC35B2Q8TB61 432 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 NAT14Q8WUY8 206 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 ADAMTS14Q8WXS8 1223 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 SNX19Q92543 992 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 SKA1Q96BD8 255 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 RTP4Q96DX8 246 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 RBM41Q96IZ5 413 aaKnown RBP5.72□□□□□ -1.49
CUX1-208ENST00000485792 QKIQ96PU8 341 aaKnown RBP eCLIP5.72□□□□□ -1.49
CUX1-208ENST00000485792 VAT1Q99536 393 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 WRAP53Q9BUR4 548 aaKnown RBP5.72□□□□□ -1.49
CUX1-208ENST00000485792 MLPHQ9BV36 600 aaPredicted RBP5.72□□□□□ -1.49
CUX1-208ENST00000485792 LGR4Q9BXB1 951 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 TEX101Q9BY14 249 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 ARNT2Q9HBZ2 717 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 NT5MQ9NPB1 228 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 GDF3Q9NR23 364 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 SMARCAL1Q9NZC9 954 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 B4GALT6Q9UBX8 382 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 DMGDHQ9UI17 866 aaKnown RBP5.72□□□□□ -1.49
CUX1-208ENST00000485792 PCDHGA1Q9Y5H4 931 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 RAI2Q9Y5P3 530 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 DGKBQ9Y6T7 804 aa5.72□□□□□ -1.49
CUX1-208ENST00000485792 RGSL1A5PLK6 1076 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 CAPN8A6NHC0 703 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 PRR19A6NJB7 356 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 A8MX80 341 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 FPGTO14772 594 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 TPP1O14773 563 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 PPP1R12AO14974 1030 aaPredicted RBP5.71□□□□□ -1.5
CUX1-208ENST00000485792 MTSS1O43312 755 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 SPOPO43791 374 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 ICMTO60725 284 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 GCATO75600 419 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 NEBLO76041 1014 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 RECQL5O94762 991 aaPredicted RBP5.71□□□□□ -1.5
CUX1-208ENST00000485792 TRIM16O95361 564 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 MT-CYBP00156 380 aaPredicted RBP5.71□□□□□ -1.5
CUX1-208ENST00000485792 ZNF30P17039 623 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 ACP1P24666 158 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 VIPR1P32241 457 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 ADRA1AP35348 466 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 GRK6P43250 576 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 ARRB1P49407 418 aaPredicted RBP5.71□□□□□ -1.5
CUX1-208ENST00000485792 NOVA1P51513 510 aaKnown RBP5.71□□□□□ -1.5
CUX1-208ENST00000485792 STC1P52823 247 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 RWDD2BP57060 319 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 KIAA1024LP59773 190 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 KIF5AQ12840 1032 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 SGCGQ13326 291 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 ZNF235Q14590 738 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 SUZ12Q15022 739 aaKnown RBP5.71□□□□□ -1.5
CUX1-208ENST00000485792 LRRC14Q15048 493 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 TRIP6Q15654 476 aaKnown RBP5.71□□□□□ -1.5
CUX1-208ENST00000485792 SMAD1Q15797 465 aaKnown RBP5.71□□□□□ -1.5
CUX1-208ENST00000485792 RNFT1Q5M7Z0 435 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 MEI1Q5TIA1 1274 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 ERAP2Q6P179 960 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 CRTC1Q6UUV9 634 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 RANBP10Q6VN20 620 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 MACC1Q6ZN28 852 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 PARGQ86W56 976 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 C17orf82Q86X59 251 aaPredicted RBP5.71□□□□□ -1.5
CUX1-208ENST00000485792 SYCE1Q8N0S2 351 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 ZNF567Q8N184 647 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 BBS5Q8N3I7 341 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 TXLNBQ8N3L3 684 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.71□□□□□ -1.5
CUX1-208ENST00000485792 OR4C6Q8NH72 309 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 CCL4L1Q8NHW4 92 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 ATG4AQ8WYN0 398 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 DTD2Q96FN9 168 aa5.71□□□□□ -1.5
CUX1-208ENST00000485792 ABHD17AQ96GS6 310 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms