RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 DOCK9Q9BZ29 2069 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 LOC285095A0A1B0GVY8 99 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 B4DGG1 531 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 AGTP01019 485 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 FGF1P05230 155 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 CEACAM5P06731 702 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 PSMB4P28070 264 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 PEX6Q13608 980 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 SLC1A5Q15758 541 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 ZNF569Q5MCW4 686 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 MEI1Q5TIA1 1274 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 KCTD16Q68DU8 428 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 GUSBP11Q6P575 273 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 GLT6D1Q7Z4J2 308 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 TMC3Q7Z5M5 1100 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 GALNT13Q8IUC8 556 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 SLC35F3Q8IY50 421 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 ARL10Q8N8L6 244 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 TRIM58Q8NG06 486 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 NAT6Q93015 286 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 OXNAD1Q96HP4 312 aaPredicted RBP12.44□□□□□ -0.42
PTCD1-205ENST00000485746 SPATA13Q96N96 652 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 CDH19Q9H159 772 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 TRABDQ9H4I3 376 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 HACD3Q9P035 362 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 CLCA2Q9UQC9 943 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 PKP3Q9Y446 797 aa12.44□□□□□ -0.42
PTCD1-205ENST00000485746 FAM221BA6H8Z2 402 aa12.43□□□□□ -0.42
PTCD1-205ENST00000485746 C5orf60A6NFR6 353 aa12.43□□□□□ -0.42
PTCD1-205ENST00000485746 OPA1O60313 960 aa12.43□□□□□ -0.42
PTCD1-205ENST00000485746 SLC25A14O95258 325 aaPredicted RBP12.43□□□□□ -0.42
PTCD1-205ENST00000485746 MT-CO3P00414 261 aa12.43□□□□□ -0.42
PTCD1-205ENST00000485746 ATP1A1P05023 1023 aaKnown RBP12.43□□□□□ -0.42
PTCD1-205ENST00000485746 PROS1P07225 676 aa12.43□□□□□ -0.42
PTCD1-205ENST00000485746 GP1BAP07359 652 aa12.43□□□□□ -0.42
PTCD1-205ENST00000485746 IVLP07476 585 aa12.43□□□□□ -0.42
PTCD1-205ENST00000485746 ACTN2P35609 894 aa12.43□□□□□ -0.42
PTCD1-205ENST00000485746 CHRNA4P43681 627 aa12.43□□□□□ -0.42
PTCD1-205ENST00000485746 INSM1Q01101 510 aaPredicted RBP12.43□□□□□ -0.42
PTCD1-205ENST00000485746 TARDBPQ13148 414 aaKnown RBP eCLIP12.43□□□□□ -0.42
PTCD1-205ENST00000485746 ST3GAL2Q16842 350 aa12.43□□□□□ -0.42
PTCD1-205ENST00000485746 HENMT1Q5T8I9 393 aaKnown RBP12.43□□□□□ -0.42
PTCD1-205ENST00000485746 SLC30A9Q6PML9 568 aa12.43□□□□□ -0.42
PTCD1-205ENST00000485746 ZNF662Q6ZS27 426 aa12.43□□□□□ -0.42
PTCD1-205ENST00000485746 TRAM1L1Q8N609 369 aa12.43□□□□□ -0.42
PTCD1-205ENST00000485746 KYQ8NBH2 561 aa12.43□□□□□ -0.42
PTCD1-205ENST00000485746 GPR26Q8NDV2 337 aa12.43□□□□□ -0.42
PTCD1-205ENST00000485746 OR6C4Q8NGE1 309 aa12.43□□□□□ -0.42
PTCD1-205ENST00000485746 CCL4L1Q8NHW4 92 aa12.43□□□□□ -0.42
PTCD1-205ENST00000485746 GDAP1Q8TB36 358 aa12.43□□□□□ -0.42
PTCD1-205ENST00000485746 GATA6Q92908 595 aa12.43□□□□□ -0.42
PTCD1-205ENST00000485746 OR2M4Q96R27 311 aa12.43□□□□□ -0.42
PTCD1-205ENST00000485746 ZSCAN5AQ9BUG6 496 aa12.43□□□□□ -0.42
PTCD1-205ENST00000485746 SLC17A4Q9Y2C5 497 aa12.43□□□□□ -0.42
PTCD1-205ENST00000485746 R3HDM2Q9Y2K5 976 aaKnown RBP12.43□□□□□ -0.42
PTCD1-205ENST00000485746 SPO11Q9Y5K1 396 aa12.43□□□□□ -0.42
PTCD1-205ENST00000485746 LY6G6EA0A0G2JKS1 128 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 TCRBV7S2A1N4TA0A589 114 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 EME2A4GXA9 379 aaPredicted RBP12.42□□□□□ -0.42
PTCD1-205ENST00000485746 TMEM8BA6NDV4 472 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 PCNX2A6NKB5 2137 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 FADS2P1A8MWK0 482 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 AURKAO14965 403 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 STX7O15400 261 aaKnown RBP12.42□□□□□ -0.42
PTCD1-205ENST00000485746 PSMD3O43242 534 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 SOD1P00441 154 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 BPIP17213 487 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 AK4P27144 223 aaPredicted RBP12.42□□□□□ -0.42
PTCD1-205ENST00000485746 ADCY8P40145 1251 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 ACTR1BP42025 376 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 LMAN1P49257 510 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 PPM1FP49593 454 aaPredicted RBP12.42□□□□□ -0.42
PTCD1-205ENST00000485746 ACTR1AP61163 376 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 CTBSQ01459 385 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 SNX1Q13596 522 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 SPARCL1Q14515 664 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 PARP6Q2NL67 630 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 ZDHHC20Q5W0Z9 365 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 SLC13A5Q86YT5 568 aaPredicted RBP12.42□□□□□ -0.42
PTCD1-205ENST00000485746 TAB3Q8N5C8 712 aaPredicted RBP12.42□□□□□ -0.42
PTCD1-205ENST00000485746 PDCD7Q8N8D1 485 aaKnown RBP12.42□□□□□ -0.42
PTCD1-205ENST00000485746 Q8N9G6 341 aaPredicted RBP12.42□□□□□ -0.42
PTCD1-205ENST00000485746 GPBAR1Q8TDU6 330 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 ZDHHC1Q8WTX9 485 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 MAIP1Q8WWC4 291 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 C1orf54Q8WWF1 131 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 COX14Q96I36 57 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 DEPDC7Q96QD5 511 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 WDR24Q96S15 920 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 TBL1YQ9BQ87 522 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 APOL2Q9BQE5 337 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 CCDC3Q9BQI4 270 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 TMEM121Q9BTD3 319 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 FRMD8P1Q9BZ68 369 aaPredicted RBP12.42□□□□□ -0.42
PTCD1-205ENST00000485746 CCDC86Q9H6F5 360 aaKnown RBP12.42□□□□□ -0.42
PTCD1-205ENST00000485746 ARFGAP3Q9NP61 516 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 TRNAU1APQ9NX07 287 aaKnown RBP12.42□□□□□ -0.42
PTCD1-205ENST00000485746 TAAR2Q9P1P5 351 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 ZNF148Q9UQR1 794 aa12.42□□□□□ -0.42
PTCD1-205ENST00000485746 AK5Q9Y6K8 562 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms