RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 CIR1Q86X95 450 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-218ENST00000482056 ZNF280BQ86YH2 543 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 CAMK1DQ8IU85 385 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 SPNS2Q8IVW8 549 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 OR13C4Q8NGS5 318 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 ZFP28Q8NHY6 868 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 HM13Q8TCT9 377 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 CANT1Q8WVQ1 401 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 SLC39A3Q9BRY0 314 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 NUSAP1Q9BXS6 441 aaKnown RBP15.31■□□□□ 0.04
C9orf3-218ENST00000482056 ANKRD60Q9BZ19 345 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 IL1RL2Q9HB29 575 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 C8orf4Q9NR00 106 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 SDR39U1Q9NRG7 319 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-218ENST00000482056 TMCO1Q9UM00 188 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 RNF11Q9Y3C5 154 aa15.31■□□□□ 0.04
C9orf3-218ENST00000482056 TYW5A2RUC4 315 aaKnown RBP15.3■□□□□ 0.04
C9orf3-218ENST00000482056 OR6C75A6NL08 312 aa15.3■□□□□ 0.04
C9orf3-218ENST00000482056 FAM155AB1AL88 458 aaPredicted RBP15.3■□□□□ 0.04
C9orf3-218ENST00000482056 F5H5T6 163 aa15.3■□□□□ 0.04
C9orf3-218ENST00000482056 NME4O00746 187 aa15.3■□□□□ 0.04
C9orf3-218ENST00000482056 SEPT4O43236 478 aa15.3■□□□□ 0.04
C9orf3-218ENST00000482056 NDUFS3O75489 264 aa15.3■□□□□ 0.04
C9orf3-218ENST00000482056 SOAT2O75908 522 aa15.3■□□□□ 0.04
C9orf3-218ENST00000482056 TMCC1O94876 653 aa15.3■□□□□ 0.04
C9orf3-218ENST00000482056 TBX18O95935 607 aa15.3■□□□□ 0.04
C9orf3-218ENST00000482056 IGLV3-27P01718 113 aa15.3■□□□□ 0.04
C9orf3-218ENST00000482056 ASLP04424 464 aa15.3■□□□□ 0.04
C9orf3-218ENST00000482056 PYGLP06737 847 aa15.3■□□□□ 0.04
C9orf3-218ENST00000482056 MTHFD2P13995 350 aa15.3■□□□□ 0.04
C9orf3-218ENST00000482056 ATP6V1B2P21281 511 aa15.3■□□□□ 0.04
C9orf3-218ENST00000482056 ZNF157P51786 506 aaPredicted RBP15.3■□□□□ 0.04
C9orf3-218ENST00000482056 SEMA3AQ14563 771 aa15.3■□□□□ 0.04
C9orf3-218ENST00000482056 PABPC1LQ4VXU2 614 aaKnown RBP15.3■□□□□ 0.04
C9orf3-218ENST00000482056 VARS2Q5ST30 1063 aaKnown RBP15.3■□□□□ 0.04
C9orf3-218ENST00000482056 LCN8Q6JVE9 175 aa15.3■□□□□ 0.04
C9orf3-218ENST00000482056 ARHGAP22Q7Z5H3 698 aa15.3■□□□□ 0.04
C9orf3-218ENST00000482056 MYO1HQ8N1T3 1032 aa15.3■□□□□ 0.04
C9orf3-218ENST00000482056 NKAPQ8N5F7 415 aaKnown RBP15.3■□□□□ 0.04
C9orf3-218ENST00000482056 CDKN2AIPNLQ96HQ2 116 aa15.3■□□□□ 0.04
C9orf3-218ENST00000482056 NLE1Q9NVX2 485 aaPredicted RBP15.3■□□□□ 0.04
C9orf3-218ENST00000482056 COMMD8Q9NX08 183 aa15.3■□□□□ 0.04
C9orf3-218ENST00000482056 ACTR3BQ9P1U1 418 aa15.3■□□□□ 0.04
C9orf3-218ENST00000482056 MAP10Q9P2G4 905 aa15.3■□□□□ 0.04
C9orf3-218ENST00000482056 SEPT3Q9UH03 358 aa15.3■□□□□ 0.04
C9orf3-218ENST00000482056 AK5Q9Y6K8 562 aa15.3■□□□□ 0.04
C9orf3-218ENST00000482056 TANC1Q9C0D5 1861 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 DYTNA2CJ06 578 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 LCHNA4D1U4 455 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 ANKRD33BA6NCL7 494 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 H3BNH8 94 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 GIPC1O14908 333 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 FCGR1AP12314 374 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 CAPN3P20807 821 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 TACR2P21452 398 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 FASP25445 335 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 KCNK10P57789 538 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 TUBA4AP68366 448 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 PRKCQQ04759 706 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 GRIK2Q13002 908 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 GRB7Q14451 532 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 PITRM1Q5JRX3 1037 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 INTS11Q5TA45 600 aaKnown RBP15.29■□□□□ 0.04
C9orf3-218ENST00000482056 ALG1LQ6GMV1 187 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 OGFOD2Q6N063 350 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 TXNDC11Q6PKC3 985 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 RASAL3Q86YV0 1011 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 PHYKPLQ8IUZ5 450 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 SLC15A3Q8IY34 581 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 COLGALT2Q8IYK4 626 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 SH3RF2Q8TEC5 729 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 LRRC58Q96CX6 371 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 SLC45A3Q96JT2 553 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 SLC29A1Q99808 456 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 TRIM54Q9BYV2 358 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 MAGEH1Q9H213 219 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 RETREG1Q9H6L5 497 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 CAAP1Q9H8G2 361 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 ATXN10Q9UBB4 475 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 POLG2Q9UHN1 485 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 SLC8A2Q9UPR5 921 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 AURKCQ9UQB9 309 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 PRG3Q9Y2Y8 225 aaPredicted RBP15.29■□□□□ 0.04
C9orf3-218ENST00000482056 BPTFQ12830 3046 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 MYOCOSA0A1B0GUC4 107 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 H3BMM5 538 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 PDLIM1O00151 329 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 STX16O14662 325 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 MLYCDO95822 493 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 LINC00032P0C843 101 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 TAF10Q12962 218 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 PTPRCAPQ14761 206 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 KCNA10Q16322 511 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 BLOC1S3Q6QNY0 202 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 SLC24A5Q71RS6 500 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 NSUN5Q96P11 429 aaKnown RBP15.29■□□□□ 0.04
C9orf3-218ENST00000482056 C9orf16Q9BUW7 83 aa15.29■□□□□ 0.04
C9orf3-218ENST00000482056 CINPQ9BW66 212 aaPredicted RBP15.29■□□□□ 0.04
C9orf3-218ENST00000482056 CLK4Q9HAZ1 481 aaKnown RBP15.29■□□□□ 0.04
C9orf3-218ENST00000482056 TIMMDC1Q9NPL8 285 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms