RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 WDR24Q96S15 920 aa18.63■□□□□ 0.57
HSPG2-210ENST00000481644 SRPK1Q96SB4 655 aaKnown RBP18.63■□□□□ 0.57
HSPG2-210ENST00000481644 GPR63Q9BZJ6 419 aa18.63■□□□□ 0.57
HSPG2-210ENST00000481644 CCDC86Q9H6F5 360 aaKnown RBP18.63■□□□□ 0.57
HSPG2-210ENST00000481644 ZMIZ1Q9ULJ6 1067 aa18.63■□□□□ 0.57
HSPG2-210ENST00000481644 FRYQ5TBA9 3013 aa18.63■□□□□ 0.57
HSPG2-210ENST00000481644 GOLGA6L9A6NEM1 432 aa18.62■□□□□ 0.57
HSPG2-210ENST00000481644 STK10O94804 968 aaKnown RBP18.62■□□□□ 0.57
HSPG2-210ENST00000481644 FUCA1P04066 466 aa18.62■□□□□ 0.57
HSPG2-210ENST00000481644 MPP3Q13368 585 aa18.62■□□□□ 0.57
HSPG2-210ENST00000481644 PERM1Q5SV97 790 aa18.62■□□□□ 0.57
HSPG2-210ENST00000481644 ITPRIPL1Q6GPH6 555 aa18.62■□□□□ 0.57
HSPG2-210ENST00000481644 TMC3Q7Z5M5 1100 aa18.62■□□□□ 0.57
HSPG2-210ENST00000481644 CACTIN-AS1Q8N1I8 211 aa18.62■□□□□ 0.57
HSPG2-210ENST00000481644 DCBLD1Q8N8Z6 715 aa18.62■□□□□ 0.57
HSPG2-210ENST00000481644 IPMKQ8NFU5 416 aa18.62■□□□□ 0.57
HSPG2-210ENST00000481644 EID2BQ96D98 161 aa18.62■□□□□ 0.57
HSPG2-210ENST00000481644 HES6Q96HZ4 224 aa18.62■□□□□ 0.57
HSPG2-210ENST00000481644 COX14Q96I36 57 aa18.62■□□□□ 0.57
HSPG2-210ENST00000481644 MRGPRX2Q96LB1 330 aa18.62■□□□□ 0.57
HSPG2-210ENST00000481644 GSDMCQ9BYG8 508 aa18.62■□□□□ 0.57
HSPG2-210ENST00000481644 GBA3Q9H227 469 aa18.62■□□□□ 0.57
HSPG2-210ENST00000481644 TRNAU1APQ9NX07 287 aaKnown RBP18.62■□□□□ 0.57
HSPG2-210ENST00000481644 TMEM98Q9Y2Y6 226 aa18.62■□□□□ 0.57
HSPG2-210ENST00000481644 SCN8AQ9UQD0 1980 aa18.62■□□□□ 0.57
HSPG2-210ENST00000481644 ASXL3Q9C0F0 2248 aa18.62■□□□□ 0.57
HSPG2-210ENST00000481644 LOC285095A0A1B0GVY8 99 aa18.61■□□□□ 0.57
HSPG2-210ENST00000481644 FADS2P1A8MWK0 482 aa18.61■□□□□ 0.57
HSPG2-210ENST00000481644 B4DGG1 531 aa18.61■□□□□ 0.57
HSPG2-210ENST00000481644 KCNN4O15554 427 aa18.61■□□□□ 0.57
HSPG2-210ENST00000481644 ASMTLO95671 621 aa18.61■□□□□ 0.57
HSPG2-210ENST00000481644 EPOP01588 193 aa18.61■□□□□ 0.57
HSPG2-210ENST00000481644 ILF3Q12906 894 aaKnown RBP eCLIP18.61■□□□□ 0.57
HSPG2-210ENST00000481644 SIRPB2Q5JXA9 342 aa18.61■□□□□ 0.57
HSPG2-210ENST00000481644 CDCP2Q5VXM1 449 aa18.61■□□□□ 0.57
HSPG2-210ENST00000481644 ALS2CLQ60I27 953 aa18.61■□□□□ 0.57
HSPG2-210ENST00000481644 MARK2Q7KZI7 788 aaKnown RBP18.61■□□□□ 0.57
HSPG2-210ENST00000481644 LRRC8AQ8IWT6 810 aa18.61■□□□□ 0.57
HSPG2-210ENST00000481644 SLC25A41Q8N5S1 370 aa18.61■□□□□ 0.57
HSPG2-210ENST00000481644 TTC13Q8NBP0 860 aa18.61■□□□□ 0.57
HSPG2-210ENST00000481644 MDM1Q8TC05 714 aa18.61■□□□□ 0.57
HSPG2-210ENST00000481644 GPBAR1Q8TDU6 330 aa18.61■□□□□ 0.57
HSPG2-210ENST00000481644 FSD1LQ9BXM9 530 aa18.61■□□□□ 0.57
HSPG2-210ENST00000481644 CDH19Q9H159 772 aa18.61■□□□□ 0.57
HSPG2-210ENST00000481644 DPEP2Q9H4A9 486 aa18.61■□□□□ 0.57
HSPG2-210ENST00000481644 RAD18Q9NS91 495 aa18.61■□□□□ 0.57
HSPG2-210ENST00000481644 SPO11Q9Y5K1 396 aa18.61■□□□□ 0.57
HSPG2-210ENST00000481644 ASPMQ8IZT6 3477 aa18.61■□□□□ 0.57
HSPG2-210ENST00000481644 KNTC1P50748 2209 aa18.61■□□□□ 0.57
HSPG2-210ENST00000481644 RP1P56715 2156 aa18.61■□□□□ 0.57
HSPG2-210ENST00000481644 ZNF189O75820 626 aaPredicted RBP18.6■□□□□ 0.57
HSPG2-210ENST00000481644 ANXA9O76027 345 aa18.6■□□□□ 0.57
HSPG2-210ENST00000481644 CAPNS1P04632 268 aa18.6■□□□□ 0.57
HSPG2-210ENST00000481644 ADCY8P40145 1251 aa18.6■□□□□ 0.57
HSPG2-210ENST00000481644 CHRNA4P43681 627 aa18.6■□□□□ 0.57
HSPG2-210ENST00000481644 GEMP55040 296 aa18.6■□□□□ 0.57
HSPG2-210ENST00000481644 DCDC1P59894 354 aa18.6■□□□□ 0.57
HSPG2-210ENST00000481644 SLC1A5Q15758 541 aa18.6■□□□□ 0.57
HSPG2-210ENST00000481644 ANKRD20A2Q5SQ80 823 aa18.6■□□□□ 0.57
HSPG2-210ENST00000481644 ANKRD20A1Q5TYW2 823 aa18.6■□□□□ 0.57
HSPG2-210ENST00000481644 ANKRD20A3Q5VUR7 823 aa18.6■□□□□ 0.57
HSPG2-210ENST00000481644 GPR26Q8NDV2 337 aa18.6■□□□□ 0.57
HSPG2-210ENST00000481644 GPR156Q8NFN8 814 aa18.6■□□□□ 0.57
HSPG2-210ENST00000481644 NXPE2Q96DL1 559 aa18.6■□□□□ 0.57
HSPG2-210ENST00000481644 SCARF2Q96GP6 870 aaPredicted RBP18.6■□□□□ 0.57
HSPG2-210ENST00000481644 DEPDC7Q96QD5 511 aa18.6■□□□□ 0.57
HSPG2-210ENST00000481644 OR2M4Q96R27 311 aa18.6■□□□□ 0.57
HSPG2-210ENST00000481644 CCDC3Q9BQI4 270 aa18.6■□□□□ 0.57
HSPG2-210ENST00000481644 SPATA16Q9BXB7 569 aa18.6■□□□□ 0.57
HSPG2-210ENST00000481644 CNOT6Q9ULM6 557 aaKnown RBP18.6■□□□□ 0.57
HSPG2-210ENST00000481644 GPSM3Q9Y4H4 160 aa18.6■□□□□ 0.57
HSPG2-210ENST00000481644 ARHGEF17Q96PE2 2063 aaPredicted RBP18.6■□□□□ 0.57
HSPG2-210ENST00000481644 AURKAO14965 403 aa18.59■□□□□ 0.57
HSPG2-210ENST00000481644 ATP1A1P05023 1023 aaKnown RBP18.59■□□□□ 0.57
HSPG2-210ENST00000481644 CCDC175P0C221 793 aa18.59■□□□□ 0.57
HSPG2-210ENST00000481644 HLA-DPA1P20036 260 aa18.59■□□□□ 0.57
HSPG2-210ENST00000481644 AK4P27144 223 aaPredicted RBP18.59■□□□□ 0.57
HSPG2-210ENST00000481644 CTBSQ01459 385 aa18.59■□□□□ 0.57
HSPG2-210ENST00000481644 CYP4F3Q08477 520 aa18.59■□□□□ 0.57
HSPG2-210ENST00000481644 KLF1Q13351 362 aaPredicted RBP18.59■□□□□ 0.57
HSPG2-210ENST00000481644 OGFOD3Q6PK18 319 aa18.59■□□□□ 0.57
HSPG2-210ENST00000481644 NRROSQ86YC3 692 aa18.59■□□□□ 0.57
HSPG2-210ENST00000481644 GALNT13Q8IUC8 556 aa18.59■□□□□ 0.57
HSPG2-210ENST00000481644 OR6C4Q8NGE1 309 aa18.59■□□□□ 0.57
HSPG2-210ENST00000481644 CCDC74AQ96AQ1 378 aa18.59■□□□□ 0.57
HSPG2-210ENST00000481644 ZSCAN5AQ9BUG6 496 aa18.59■□□□□ 0.57
HSPG2-210ENST00000481644 TRABDQ9H4I3 376 aa18.59■□□□□ 0.57
HSPG2-210ENST00000481644 VPS18Q9P253 973 aa18.59■□□□□ 0.57
HSPG2-210ENST00000481644 NFKBIL1Q9UBC1 381 aaPredicted RBP18.59■□□□□ 0.57
HSPG2-210ENST00000481644 OAS3Q9Y6K5 1087 aaKnown RBP18.59■□□□□ 0.57
HSPG2-210ENST00000481644 IGF2RP11717 2491 aa18.59■□□□□ 0.57
HSPG2-210ENST00000481644 ZFC3H1O60293 1989 aaKnown RBP18.59■□□□□ 0.57
HSPG2-210ENST00000481644 COL27A1Q8IZC6 1860 aaPredicted RBP18.58■□□□□ 0.57
HSPG2-210ENST00000481644 NRDCO43847 1150 aa18.58■□□□□ 0.56
HSPG2-210ENST00000481644 NOBOXO60393 691 aa18.58■□□□□ 0.56
HSPG2-210ENST00000481644 CSO75390 466 aaKnown RBP18.58■□□□□ 0.56
HSPG2-210ENST00000481644 FGF1P05230 155 aa18.58■□□□□ 0.56
HSPG2-210ENST00000481644 BPIP17213 487 aa18.58■□□□□ 0.56
HSPG2-210ENST00000481644 PSMB4P28070 264 aa18.58■□□□□ 0.56
HSPG2-210ENST00000481644 PRPSAP1Q14558 356 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms