RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 CAPN15O75808 1086 aa10.62□□□□□ -0.71
SIK3-210ENST00000480468 UBL4AP11441 157 aa10.62□□□□□ -0.71
SIK3-210ENST00000480468 RYKP34925 604 aa10.62□□□□□ -0.71
SIK3-210ENST00000480468 CLK3P49761 638 aaKnown RBP10.62□□□□□ -0.71
SIK3-210ENST00000480468 CLCNKBP51801 687 aa10.62□□□□□ -0.71
SIK3-210ENST00000480468 ISL1P61371 349 aa10.62□□□□□ -0.71
SIK3-210ENST00000480468 IGBP1P78318 339 aa10.62□□□□□ -0.71
SIK3-210ENST00000480468 OLIG2Q13516 323 aa10.62□□□□□ -0.71
SIK3-210ENST00000480468 CAPRIN1Q14444 709 aaKnown RBP10.62□□□□□ -0.71
SIK3-210ENST00000480468 ARHGEF6Q15052 776 aa10.62□□□□□ -0.71
SIK3-210ENST00000480468 PAFAH1B3Q15102 231 aaKnown RBP10.62□□□□□ -0.71
SIK3-210ENST00000480468 CARTPTQ16568 116 aa10.62□□□□□ -0.71
SIK3-210ENST00000480468 PKDCCQ504Y2 493 aa10.62□□□□□ -0.71
SIK3-210ENST00000480468 CERCAMQ5T4B2 595 aa10.62□□□□□ -0.71
SIK3-210ENST00000480468 STRIP1Q5VSL9 837 aa10.62□□□□□ -0.71
SIK3-210ENST00000480468 PNCKQ6P2M8 343 aa10.62□□□□□ -0.71
SIK3-210ENST00000480468 BLOC1S3Q6QNY0 202 aa10.62□□□□□ -0.71
SIK3-210ENST00000480468 NT5DC4Q86YG4 428 aa10.62□□□□□ -0.71
SIK3-210ENST00000480468 IL17RDQ8NFM7 739 aa10.62□□□□□ -0.71
SIK3-210ENST00000480468 SDCCAG3Q96C92 435 aa10.62□□□□□ -0.71
SIK3-210ENST00000480468 ALOXE3Q9BYJ1 711 aa10.62□□□□□ -0.71
SIK3-210ENST00000480468 FAM49AQ9H0Q0 323 aaPredicted RBP10.62□□□□□ -0.71
SIK3-210ENST00000480468 PRDM12Q9H4Q4 367 aa10.62□□□□□ -0.71
SIK3-210ENST00000480468 EPS8L2Q9H6S3 715 aa10.62□□□□□ -0.71
SIK3-210ENST00000480468 FBRSL1Q9HCM7 1045 aaKnown RBP10.62□□□□□ -0.71
SIK3-210ENST00000480468 IGSF5Q9NSI5 407 aa10.62□□□□□ -0.71
SIK3-210ENST00000480468 KLHL8Q9P2G9 620 aaPredicted RBP10.62□□□□□ -0.71
SIK3-210ENST00000480468 INTS6Q9UL03 887 aaKnown RBP10.62□□□□□ -0.71
SIK3-210ENST00000480468 MAFBQ9Y5Q3 323 aaPredicted RBP10.62□□□□□ -0.71
SIK3-210ENST00000480468 G3V3G9 751 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 USP12O75317 370 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 SNX4O95219 450 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 NR3C2P08235 984 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 RAP2AP10114 183 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 TCF3P15923 654 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 SPNP16150 400 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 PTPN3P26045 913 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 NMBRP28336 390 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 POU4F1Q01851 419 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 ZNF45Q02386 682 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 MVKQ03426 396 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 ATAD3CQ5T2N8 411 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 DCAF8Q5TAQ9 597 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 MAP1SQ66K74 1059 aaPredicted RBP10.61□□□□□ -0.71
SIK3-210ENST00000480468 ERAP2Q6P179 960 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 CCDC81Q6ZN84 652 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 STK32CQ86UX6 486 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 CCDC185Q8N715 623 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 C1orf127Q8N9H9 656 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 MCFD2Q8NI22 146 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 LPAR1Q92633 364 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 SLC10A4Q96EP9 437 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 REXO5Q96IC2 774 aaKnown RBP10.61□□□□□ -0.71
SIK3-210ENST00000480468 RNF145Q96MT1 663 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 DHRS9Q9BPW9 319 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 C2orf40Q9H1Z8 148 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 GSTO2Q9H4Y5 243 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 AKTIPQ9H8T0 292 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 SETD4Q9NVD3 440 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 MAGEL2Q9UJ55 1249 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 MAU2Q9Y6X3 613 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 KIAA1217Q5T5P2 1943 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 A0A1W2PP18 115 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 NEMP2A6NFY4 417 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 TNPO2O14787 897 aaKnown RBP10.61□□□□□ -0.71
SIK3-210ENST00000480468 FKBP9O95302 570 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 RBP1P09455 135 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 HRH2P25021 359 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 UGT2B10P36537 528 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 RGS7P49802 495 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 VBP1P61758 197 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 PPP2R2BQ00005 443 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 PRKCDQ05655 676 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 POU5F1BQ06416 359 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 PIGFQ07326 219 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 GRIK2Q13002 908 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 FSCN1Q16658 493 aaKnown RBP10.61□□□□□ -0.71
SIK3-210ENST00000480468 DUSP7Q16829 419 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 GOLGA7BQ2TAP0 167 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 BRMS1LQ5PSV4 323 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 DACT2Q5SW24 774 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 ZNF470Q6ECI4 717 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 ZCCHC8Q6NZY4 707 aaKnown RBP10.61□□□□□ -0.71
SIK3-210ENST00000480468 MPZL3Q6UWV2 235 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 CCBE1Q6UXH8 406 aaPredicted RBP10.61□□□□□ -0.71
SIK3-210ENST00000480468 RBM23Q86U06 439 aaKnown RBP10.61□□□□□ -0.71
SIK3-210ENST00000480468 ZDHHC13Q8IUH4 622 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 CCDC103Q8IW40 242 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 MFSD6LQ8IWD5 586 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 CLYBLQ8N0X4 340 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 SVOPLQ8N434 492 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 CCNYQ8ND76 341 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 GABPB2Q8TAK5 448 aaPredicted RBP10.61□□□□□ -0.71
SIK3-210ENST00000480468 L3HYPDHQ96EM0 354 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 MAGEB5Q9BZ81 275 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 AMBRA1Q9C0C7 1298 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 SNTG2Q9NY99 539 aa10.61□□□□□ -0.71
SIK3-210ENST00000480468 CCNL1Q9UK58 526 aaPredicted RBP10.61□□□□□ -0.71
SIK3-210ENST00000480468 NRCAMQ92823 1304 aa10.6□□□□□ -0.71
SIK3-210ENST00000480468 FNDC1Q4ZHG4 1894 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms