RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 PCDHGA12O60330 932 aa26.65■■□□□ 1.86
CCM2-211ENST00000478582 LPOP22079 712 aaPredicted RBP26.65■■□□□ 1.86
CCM2-211ENST00000478582 GPR1P46091 355 aa26.65■■□□□ 1.86
CCM2-211ENST00000478582 VPS41P49754 854 aa26.65■■□□□ 1.86
CCM2-211ENST00000478582 FOXC1Q12948 553 aa26.65■■□□□ 1.86
CCM2-211ENST00000478582 PTK6Q13882 451 aa26.65■■□□□ 1.86
CCM2-211ENST00000478582 KCNJ11Q14654 390 aa26.65■■□□□ 1.86
CCM2-211ENST00000478582 KCTD19Q17RG1 926 aaPredicted RBP26.65■■□□□ 1.86
CCM2-211ENST00000478582 PPP1R21Q6ZMI0 780 aa26.65■■□□□ 1.86
CCM2-211ENST00000478582 AGAP2Q99490 1192 aa26.65■■□□□ 1.86
CCM2-211ENST00000478582 WDR26Q9H7D7 661 aa26.65■■□□□ 1.86
CCM2-211ENST00000478582 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP26.65■■□□□ 1.86
CCM2-211ENST00000478582 PKP3Q9Y446 797 aa26.65■■□□□ 1.86
CCM2-211ENST00000478582 AP3B1O00203 1094 aa26.64■■□□□ 1.86
CCM2-211ENST00000478582 CACNB4O00305 520 aaPredicted RBP26.64■■□□□ 1.86
CCM2-211ENST00000478582 YKT6O15498 198 aa26.64■■□□□ 1.86
CCM2-211ENST00000478582 SLC4A1P02730 911 aa26.64■■□□□ 1.86
CCM2-211ENST00000478582 TPH1P17752 444 aa26.64■■□□□ 1.86
CCM2-211ENST00000478582 HTR1BP28222 390 aa26.64■■□□□ 1.86
CCM2-211ENST00000478582 GRIA1P42261 906 aa26.64■■□□□ 1.86
CCM2-211ENST00000478582 PPP1R7Q15435 360 aa26.64■■□□□ 1.86
CCM2-211ENST00000478582 PARGQ86W56 976 aa26.64■■□□□ 1.86
CCM2-211ENST00000478582 DNAAF3Q8N9W5 541 aa26.64■■□□□ 1.86
CCM2-211ENST00000478582 CNTNAP3BQ96NU0 1288 aa26.64■■□□□ 1.86
CCM2-211ENST00000478582 CNTNAP3Q9BZ76 1288 aa26.64■■□□□ 1.86
CCM2-211ENST00000478582 PHPT1Q9NRX4 125 aaPredicted RBP26.64■■□□□ 1.86
CCM2-211ENST00000478582 WASF3Q9UPY6 502 aa26.64■■□□□ 1.86
CCM2-211ENST00000478582 ARL5AQ9Y689 179 aa26.64■■□□□ 1.86
CCM2-211ENST00000478582 STX7O15400 261 aaKnown RBP26.63■■□□□ 1.85
CCM2-211ENST00000478582 LDB2O43679 373 aa26.63■■□□□ 1.85
CCM2-211ENST00000478582 URI1O94763 535 aaPredicted RBP26.63■■□□□ 1.85
CCM2-211ENST00000478582 MYCLP1P12525 358 aaPredicted RBP26.63■■□□□ 1.85
CCM2-211ENST00000478582 ARRB1P49407 418 aaPredicted RBP26.63■■□□□ 1.85
CCM2-211ENST00000478582 CDK3Q00526 305 aa26.63■■□□□ 1.85
CCM2-211ENST00000478582 EIF2B5Q13144 721 aaKnown RBP26.63■■□□□ 1.85
CCM2-211ENST00000478582 TUBB2AQ13885 445 aa26.63■■□□□ 1.85
CCM2-211ENST00000478582 DHX34Q14147 1143 aaKnown RBP26.63■■□□□ 1.85
CCM2-211ENST00000478582 SHBQ15464 509 aa26.63■■□□□ 1.85
CCM2-211ENST00000478582 PRAMEF14Q5SWL7 426 aa26.63■■□□□ 1.85
CCM2-211ENST00000478582 PDPK2PQ6A1A2 396 aa26.63■■□□□ 1.85
CCM2-211ENST00000478582 GLRX5Q86SX6 157 aa26.63■■□□□ 1.85
CCM2-211ENST00000478582 HEATR4Q86WZ0 1026 aa26.63■■□□□ 1.85
CCM2-211ENST00000478582 TRAM1L1Q8N609 369 aa26.63■■□□□ 1.85
CCM2-211ENST00000478582 RHBDD1Q8TEB9 315 aa26.63■■□□□ 1.85
CCM2-211ENST00000478582 CPT1BQ92523 772 aa26.63■■□□□ 1.85
CCM2-211ENST00000478582 ZNF592Q92610 1267 aa26.63■■□□□ 1.85
CCM2-211ENST00000478582 ZSCAN5AQ9BUG6 496 aa26.63■■□□□ 1.85
CCM2-211ENST00000478582 TUBB2BQ9BVA1 445 aa26.63■■□□□ 1.85
CCM2-211ENST00000478582 LGR4Q9BXB1 951 aa26.63■■□□□ 1.85
CCM2-211ENST00000478582 BPIFA1Q9NP55 256 aa26.63■■□□□ 1.85
CCM2-211ENST00000478582 TNFRSF10CO14798 259 aa26.62■■□□□ 1.85
CCM2-211ENST00000478582 CSF2P04141 144 aa26.62■■□□□ 1.85
CCM2-211ENST00000478582 KELP23276 732 aa26.62■■□□□ 1.85
CCM2-211ENST00000478582 DR1Q01658 176 aa26.62■■□□□ 1.85
CCM2-211ENST00000478582 BAHD1Q8TBE0 780 aaPredicted RBP26.62■■□□□ 1.85
CCM2-211ENST00000478582 WDR92Q96MX6 357 aa26.62■■□□□ 1.85
CCM2-211ENST00000478582 PIH1D1Q9NWS0 290 aaKnown RBP26.62■■□□□ 1.85
CCM2-211ENST00000478582 TCRBV7S3A2A0A539 114 aa26.61■■□□□ 1.85
CCM2-211ENST00000478582 BUD23O43709 281 aaKnown RBP26.61■■□□□ 1.85
CCM2-211ENST00000478582 TRIM16O95361 564 aa26.61■■□□□ 1.85
CCM2-211ENST00000478582 NME1P15531 152 aaKnown RBP26.61■■□□□ 1.85
CCM2-211ENST00000478582 SPAM1P38567 509 aa26.61■■□□□ 1.85
CCM2-211ENST00000478582 ZNF140P52738 457 aaPredicted RBP26.61■■□□□ 1.85
CCM2-211ENST00000478582 CKAP4Q07065 602 aaKnown RBP26.61■■□□□ 1.85
CCM2-211ENST00000478582 WHAMMP3Q1A5X7 153 aa26.61■■□□□ 1.85
CCM2-211ENST00000478582 LRRC8BQ6P9F7 803 aa26.61■■□□□ 1.85
CCM2-211ENST00000478582 OR4K2Q8NGD2 314 aa26.61■■□□□ 1.85
CCM2-211ENST00000478582 KIF18AQ8NI77 898 aa26.61■■□□□ 1.85
CCM2-211ENST00000478582 COX14Q96I36 57 aa26.61■■□□□ 1.85
CCM2-211ENST00000478582 HIC2Q96JB3 615 aa26.61■■□□□ 1.85
CCM2-211ENST00000478582 RANBP9Q96S59 729 aa26.61■■□□□ 1.85
CCM2-211ENST00000478582 KRT12Q99456 494 aa26.61■■□□□ 1.85
CCM2-211ENST00000478582 CDC6Q99741 560 aa26.61■■□□□ 1.85
CCM2-211ENST00000478582 SPATA16Q9BXB7 569 aa26.61■■□□□ 1.85
CCM2-211ENST00000478582 IL26Q9NPH9 171 aa26.61■■□□□ 1.85
CCM2-211ENST00000478582 CNOT6Q9ULM6 557 aaKnown RBP26.61■■□□□ 1.85
CCM2-211ENST00000478582 BTBD3Q9Y2F9 522 aa26.61■■□□□ 1.85
CCM2-211ENST00000478582 KCTD3Q9Y597 815 aa26.61■■□□□ 1.85
CCM2-211ENST00000478582 MROH6A6NGR9 719 aa26.6■■□□□ 1.85
CCM2-211ENST00000478582 FADS2P1A8MWK0 482 aa26.6■■□□□ 1.85
CCM2-211ENST00000478582 PSMA3P25788 255 aa26.6■■□□□ 1.85
CCM2-211ENST00000478582 ADCY8P40145 1251 aa26.6■■□□□ 1.85
CCM2-211ENST00000478582 GRK6P43250 576 aa26.6■■□□□ 1.85
CCM2-211ENST00000478582 SARNPP82979 210 aaKnown RBP26.6■■□□□ 1.85
CCM2-211ENST00000478582 IL9RQ01113 521 aa26.6■■□□□ 1.85
CCM2-211ENST00000478582 LAMB3Q13751 1172 aa26.6■■□□□ 1.85
CCM2-211ENST00000478582 PTPRCAPQ14761 206 aa26.6■■□□□ 1.85
CCM2-211ENST00000478582 POU6F1Q14863 301 aa26.6■■□□□ 1.85
CCM2-211ENST00000478582 CERCAMQ5T4B2 595 aa26.6■■□□□ 1.85
CCM2-211ENST00000478582 ALS2CLQ60I27 953 aa26.6■■□□□ 1.85
CCM2-211ENST00000478582 ENPP7Q6UWV6 458 aa26.6■■□□□ 1.85
CCM2-211ENST00000478582 ZNF534Q76KX8 674 aa26.6■■□□□ 1.85
CCM2-211ENST00000478582 JAMLQ86YT9 394 aa26.6■■□□□ 1.85
CCM2-211ENST00000478582 MCUQ8NE86 351 aa26.6■■□□□ 1.85
CCM2-211ENST00000478582 OR56A4Q8NGH8 313 aa26.6■■□□□ 1.85
CCM2-211ENST00000478582 FRMD8Q9BZ67 464 aaPredicted RBP26.6■■□□□ 1.85
CCM2-211ENST00000478582 ASIC3Q9UHC3 531 aa26.6■■□□□ 1.85
CCM2-211ENST00000478582 PNMA8BQ9ULN7 279 aaPredicted RBP26.6■■□□□ 1.85
CCM2-211ENST00000478582 SCN8AQ9UQD0 1980 aa26.6■■□□□ 1.85
CCM2-211ENST00000478582 TMEM202A6NGA9 273 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms