RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-222	ENST00000478279	LZTR1	Q8N653	840 aa		10.51	□□□□□ -0.73
APTX-222	ENST00000478279	RNF31	Q96EP0	1072 aa		10.51	□□□□□ -0.73
APTX-222	ENST00000478279	STAMBPL1	Q96FJ0	436 aa		10.51	□□□□□ -0.73
APTX-222	ENST00000478279	C11orf70	Q9BRQ4	267 aa		10.51	□□□□□ -0.73
APTX-222	ENST00000478279	NAA15	Q9BXJ9	866 aa	Known RBP	10.51	□□□□□ -0.73
APTX-222	ENST00000478279	TRIM55	Q9BYV6	548 aa		10.51	□□□□□ -0.73
APTX-222	ENST00000478279	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	10.51	□□□□□ -0.73
APTX-222	ENST00000478279	SLC39A8	Q9C0K1	460 aa		10.51	□□□□□ -0.73
APTX-222	ENST00000478279	FZD10	Q9ULW2	581 aa		10.51	□□□□□ -0.73
APTX-222	ENST00000478279	PCDHGA9	Q9Y5G4	932 aa	Known RBP	10.51	□□□□□ -0.73
APTX-222	ENST00000478279	FHOD1	Q9Y613	1164 aa		10.51	□□□□□ -0.73
APTX-222	ENST00000478279	ZNF106	Q9H2Y7	1883 aa	Known RBP	10.51	□□□□□ -0.73
APTX-222	ENST00000478279	F8	P00451	2351 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	TCP11X1	B4DZS4	312 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	SOCS5	O75159	536 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	KIAA0754	O94854	1291 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	SOD1	P00441	154 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	CCNYL3	P0C7X3	344 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	CYP2A6	P11509	494 aa	Predicted RBP	10.5	□□□□□ -0.73
APTX-222	ENST00000478279	LHCGR	P22888	699 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	GARS	P41250	739 aa	Known RBP	10.5	□□□□□ -0.73
APTX-222	ENST00000478279	MAPK9	P45984	424 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	RENBP	P51606	427 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	AIF1	P55008	147 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	TPI1	P60174	286 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	IL10RB	Q08334	325 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	PTP4A2	Q12974	167 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	MRPL49	Q13405	166 aa	Known RBP	10.5	□□□□□ -0.73
APTX-222	ENST00000478279	DNASE1L3	Q13609	305 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	IL11RA	Q14626	422 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	MAN2A1	Q16706	1144 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	KLHDC7A	Q5VTJ3	777 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	IYD	Q6PHW0	289 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	MARK2	Q7KZI7	788 aa	Known RBP	10.5	□□□□□ -0.73
APTX-222	ENST00000478279	TECPR1	Q7Z6L1	1165 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	SLC9B2	Q86UD5	537 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	RASGRP3	Q8IV61	690 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	SLC30A5	Q8TAD4	765 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	PRR7	Q8TB68	274 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	PSKH2	Q96QS6	385 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	PHF12	Q96QT6	1004 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	SLC25A23	Q9BV35	468 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	TBC1D10A	Q9BXI6	508 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	STK33	Q9BYT3	514 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	SLC29A3	Q9BZD2	475 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	SP110	Q9HB58	689 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	MLXIPL	Q9NP71	852 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	RCOR3	Q9P2K3	495 aa	Predicted RBP	10.5	□□□□□ -0.73
APTX-222	ENST00000478279	PADI1	Q9ULC6	663 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	PHTF1	Q9UMS5	762 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	PCDHGC4	Q9Y5F7	938 aa		10.5	□□□□□ -0.73
APTX-222	ENST00000478279	MN1	Q10571	1320 aa	Predicted RBP	10.5	□□□□□ -0.73
APTX-222	ENST00000478279	POLE	Q07864	2286 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	GOLGA6L3	A6NEY3	463 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	CCP110	O43303	1012 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	NDUFA10	O95299	355 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	CP	P00450	1065 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	LDLR	P01130	860 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	C9	P02748	559 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	UCHL3	P15374	230 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	CHRNB2	P17787	502 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	VARS	P26640	1264 aa	Known RBP	10.49	□□□□□ -0.73
APTX-222	ENST00000478279	CASP14	P31944	242 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	ZNF143	P52747	638 aa	Predicted RBP	10.49	□□□□□ -0.73
APTX-222	ENST00000478279	GSC	P56915	257 aa	Predicted RBP	10.49	□□□□□ -0.73
APTX-222	ENST00000478279	FMO1	Q01740	532 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	CDR2	Q01850	454 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	VWA3B	Q502W6	1294 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	PAPD7	Q5XG87	772 aa	Known RBP	10.49	□□□□□ -0.73
APTX-222	ENST00000478279	TRIM74	Q86UV6	250 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	NLRP8	Q86W28	1048 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	ARHGAP12	Q8IWW6	846 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	SRRM1	Q8IYB3	904 aa	Known RBP	10.49	□□□□□ -0.73
APTX-222	ENST00000478279	FNIP1	Q8TF40	1166 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	PDCD6IP	Q8WUM4	868 aa	Known RBP	10.49	□□□□□ -0.73
APTX-222	ENST00000478279	SLC20A1	Q8WUM9	679 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	THAP4	Q8WY91	577 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	SEC14L1	Q92503	715 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	AP2M1	Q96CW1	435 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	SCRN2	Q96FV2	425 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	TCTN2	Q96GX1	697 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	C9orf72	Q96LT7	481 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	OR6C1	Q96RD1	312 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	MCCC1	Q96RQ3	725 aa	Predicted RBP	10.49	□□□□□ -0.73
APTX-222	ENST00000478279	HERPUD2	Q9BSE4	406 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	SELENOO	Q9BVL4	669 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	ABCG8	Q9H221	673 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	NDST4	Q9H3R1	872 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	ADAM22	Q9P0K1	906 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	CNOT8	Q9UFF9	292 aa	Known RBP	10.49	□□□□□ -0.73
APTX-222	ENST00000478279	TBC1D29	Q9UFV1	150 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	LNPEP	Q9UIQ6	1025 aa		10.49	□□□□□ -0.73
APTX-222	ENST00000478279	ERRFI1	Q9UJM3	462 aa	Predicted RBP	10.49	□□□□□ -0.73
APTX-222	ENST00000478279	NOCT	Q9UK39	431 aa	Known RBP	10.49	□□□□□ -0.73
APTX-222	ENST00000478279	DIDO1	Q9BTC0	2240 aa	Known RBP	10.49	□□□□□ -0.73
APTX-222	ENST00000478279	CELSR1	Q9NYQ6	3014 aa		10.48	□□□□□ -0.73
APTX-222	ENST00000478279	KIR2DS5	A0A0G2JLQ3	304 aa		10.48	□□□□□ -0.73
APTX-222	ENST00000478279		A0A0G2JNG1	304 aa		10.48	□□□□□ -0.73
APTX-222	ENST00000478279	TTC24	A2A3L6	582 aa	Predicted RBP	10.48	□□□□□ -0.73
APTX-222	ENST00000478279		A6NCN8	305 aa		10.48	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms