RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 ATXN7L1Q9ULK2 861 aaPredicted RBP10.74□□□□□ -0.69
SEC13-214ENST00000476597 CNOT6Q9ULM6 557 aaKnown RBP10.74□□□□□ -0.69
SEC13-214ENST00000476597 PLEKHM1Q9Y4G2 1056 aa10.74□□□□□ -0.69
SEC13-214ENST00000476597 HYOU1Q9Y4L1 999 aa10.74□□□□□ -0.69
SEC13-214ENST00000476597 RP1P56715 2156 aa10.74□□□□□ -0.69
SEC13-214ENST00000476597 BAHCC1Q9P281 2608 aa10.74□□□□□ -0.69
SEC13-214ENST00000476597 GCN1Q92616 2671 aaKnown RBP10.74□□□□□ -0.69
SEC13-214ENST00000476597 MYLKQ15746 1914 aa10.74□□□□□ -0.69
SEC13-214ENST00000476597 ATMQ13315 3056 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 LCA5LO95447 670 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 KRT1P04264 644 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 UGT1A5P35504 534 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 CDKN2BP42772 138 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 SPINT3P49223 89 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 HADHBP55084 474 aaKnown RBP10.73□□□□□ -0.69
SEC13-214ENST00000476597 UCNP55089 124 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 MAZP56270 477 aaKnown RBP10.73□□□□□ -0.69
SEC13-214ENST00000476597 NR1D2Q14995 579 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 TEX44Q53QW1 395 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 SLC30A9Q6PML9 568 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 BZW1Q7L1Q6 419 aaKnown RBP10.73□□□□□ -0.69
SEC13-214ENST00000476597 GPR155Q7Z3F1 870 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 TMPRSS9Q7Z410 1059 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 ZNF438Q7Z4V0 828 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 TRIM74Q86UV6 250 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 NT5DC3Q86UY8 548 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 RFX6Q8HWS3 928 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 SLITRK4Q8IW52 837 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 NAGSQ8N159 534 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 TC2NQ8N9U0 490 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 CCHCR1Q8TD31 782 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 TADA1Q96BN2 335 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 EID2BQ96D98 161 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 CCDC97Q96F63 343 aaPredicted RBP10.73□□□□□ -0.69
SEC13-214ENST00000476597 ADGRE3Q9BY15 652 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 SLC25A51Q9H1U9 297 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 EPB41L5Q9HCM4 733 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 PKD2L2Q9NZM6 624 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 PCDHGA7Q9Y5G6 932 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 ALG6Q9Y672 507 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 LRRK1Q38SD2 2015 aa10.73□□□□□ -0.69
SEC13-214ENST00000476597 C1orf232A0A0U1RR37 186 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 RHPN2P1A8MT19 583 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 PPP1R12AO14974 1030 aaPredicted RBP10.72□□□□□ -0.69
SEC13-214ENST00000476597 PPM1DO15297 605 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 INPP4BO15327 924 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 KLK10O43240 276 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 ZW10O43264 779 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 SPOPO43791 374 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 DNAJC6O75061 913 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 ASMTLO95671 621 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 TNNT1P13805 278 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 ACTR1BP42025 376 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 NOP2P46087 812 aaKnown RBP10.72□□□□□ -0.69
SEC13-214ENST00000476597 GPR3P46089 330 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 NR2C2P49116 596 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 OR1D5P58170 312 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 ACTR1AP61163 376 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 CXADRP78310 365 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 CDK18Q07002 472 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 SQSTM1Q13501 440 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 COL9A2Q14055 689 aaPredicted RBP10.72□□□□□ -0.69
SEC13-214ENST00000476597 TFDP2Q14188 446 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 SLC14A2Q15849 920 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 CLPPQ16740 277 aaPredicted RBP10.72□□□□□ -0.69
SEC13-214ENST00000476597 ODF2Q5BJF6 829 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 HENMT1Q5T8I9 393 aaKnown RBP10.72□□□□□ -0.69
SEC13-214ENST00000476597 BROXQ5VW32 411 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 B4GALNT4Q76KP1 1039 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 MARK2Q7KZI7 788 aaKnown RBP10.72□□□□□ -0.69
SEC13-214ENST00000476597 KDELC2Q7Z4H8 507 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 TMC3Q7Z5M5 1100 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 PIM3Q86V86 326 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 LSM14AQ8ND56 463 aaKnown RBP10.72□□□□□ -0.69
SEC13-214ENST00000476597 PATE1Q8WXA2 126 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 TMEM159Q96B96 161 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 TEKT5Q96M29 485 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 AGAP3Q96P47 875 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 OR2M4Q96R27 311 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 CEP41Q9BYV8 373 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 TRIM5Q9C035 493 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 CDH19Q9H159 772 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 GLOD4Q9HC38 313 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 MAGEE1Q9HCI5 957 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 VPS18Q9P253 973 aa10.72□□□□□ -0.69
SEC13-214ENST00000476597 OAS3Q9Y6K5 1087 aaKnown RBP10.72□□□□□ -0.69
SEC13-214ENST00000476597 HELZ2Q9BYK8 2649 aaKnown RBP10.72□□□□□ -0.69
SEC13-214ENST00000476597 TEX51A0A1B0GUA7 166 aa10.71□□□□□ -0.69
SEC13-214ENST00000476597 FADS2P1A8MWK0 482 aa10.71□□□□□ -0.69
SEC13-214ENST00000476597 TK2O00142 265 aa10.71□□□□□ -0.69
SEC13-214ENST00000476597 ATXN7O15265 892 aaPredicted RBP10.71□□□□□ -0.69
SEC13-214ENST00000476597 PSTPIP1O43586 416 aa10.71□□□□□ -0.69
SEC13-214ENST00000476597 ZRANB2O95218 330 aaKnown RBP eCLIP10.71□□□□□ -0.69
SEC13-214ENST00000476597 CPNE6O95741 557 aa10.71□□□□□ -0.69
SEC13-214ENST00000476597 ATP1A1P05023 1023 aaKnown RBP10.71□□□□□ -0.69
SEC13-214ENST00000476597 HGFP14210 728 aa10.71□□□□□ -0.69
SEC13-214ENST00000476597 PTPN3P26045 913 aa10.71□□□□□ -0.69
SEC13-214ENST00000476597 CD1CP29017 333 aa10.71□□□□□ -0.69
SEC13-214ENST00000476597 ALDH4A1P30038 563 aa10.71□□□□□ -0.69
SEC13-214ENST00000476597 SLC5A2P31639 672 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms