RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 CARNMT1Q8N4J0 409 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 AADATQ8N5Z0 425 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 ZNF655Q8N720 491 aaPredicted RBP11.5□□□□□ -0.57
U2AF1-209ENST00000475639 TTC29Q8NA56 475 aaPredicted RBP11.5□□□□□ -0.57
U2AF1-209ENST00000475639 UBE2E3Q969T4 207 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 B3GNT3Q9Y2A9 372 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 TNPO3Q9Y5L0 923 aaKnown RBP11.5□□□□□ -0.57
U2AF1-209ENST00000475639 A0A0G2JPF8 293 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 ANKDD1BA6NHY2 528 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 A6NL46 340 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 HNRNPCL3B7ZW38 293 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 ZNF195O14628 629 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 HNRNPCL4P0DMR1 293 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 ITGA2P17301 1181 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 DCKP27707 260 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 LSM12Q3MHD2 195 aaKnown RBP11.5□□□□□ -0.57
U2AF1-209ENST00000475639 FAM47BQ8NA70 645 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 ACDQ96AP0 544 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 CBWD1Q9BRT8 395 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 HERC2P3Q9BVR0 1158 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 GPN1Q9HCN4 374 aaPredicted RBP11.5□□□□□ -0.57
U2AF1-209ENST00000475639 PTPRHQ9HD43 1115 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 CCNB1IP1Q9NPC3 277 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 CPQQ9Y646 472 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 NAV1Q8NEY1 1877 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 HOXA2O43364 376 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 RSL1D1O76021 490 aaKnown RBP11.49□□□□□ -0.57
U2AF1-209ENST00000475639 FGFR3P22607 806 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 ADSLP30566 484 aaPredicted RBP11.49□□□□□ -0.57
U2AF1-209ENST00000475639 RPL22P35268 128 aaKnown RBP11.49□□□□□ -0.57
U2AF1-209ENST00000475639 ARL3P36405 182 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 CLK3P49761 638 aaKnown RBP11.49□□□□□ -0.57
U2AF1-209ENST00000475639 PRKAG1P54619 331 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 PKNOX1P55347 436 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 PMS2P3Q13401 168 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 CEACAM7Q14002 265 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 MBLAC2Q68D91 279 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 ERICH5Q6P6B1 374 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 ANKK1Q8NFD2 765 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 SLC35B2Q8TB61 432 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 ADAMTS16Q8TE57 1224 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 SLC29A1Q99808 456 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 NPLQ9BXD5 320 aaPredicted RBP11.49□□□□□ -0.57
U2AF1-209ENST00000475639 TRIM2Q9C040 744 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 OPTCQ9UBM4 332 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 PRPF19Q9UMS4 504 aaKnown RBP11.49□□□□□ -0.57
U2AF1-209ENST00000475639 CARD8Q9Y2G2 431 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 RPS6KA4O75676 772 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 ZNF432O94892 652 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 OR5F1O95221 314 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 TSHRP16473 764 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 TYMPP19971 482 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 NR4A1P22736 598 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 ARRB2P32121 409 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 NOVP48745 357 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 TCEA2Q15560 299 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 PPP2R2DQ66LE6 453 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 TXNRD3NBQ6F5E7 133 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 TATDN1Q6P1N9 297 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 SLC30A10Q6XR72 485 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 C16orf86Q6ZW13 317 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 MON1BQ7L1V2 547 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 BTLAQ7Z6A9 289 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 UBR7Q8N806 425 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 ZNF420Q8TAQ5 688 aaPredicted RBP11.49□□□□□ -0.57
U2AF1-209ENST00000475639 LENG8Q96PV6 779 aaPredicted RBP11.49□□□□□ -0.57
U2AF1-209ENST00000475639 PSD2Q9BQI7 771 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 NKIRAS2Q9NYR9 191 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 XPR1Q9UBH6 696 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 FAM50BQ9Y247 325 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 SNAP91O60641 907 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 ALOX5P09917 674 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 THRBP10828 461 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 MAMLD1Q13495 774 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 POU6F1Q14863 301 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 RFX4Q33E94 735 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 SPOCD1Q6ZMY3 1216 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 ARHGAP36Q6ZRI8 547 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 RD3Q7Z3Z2 195 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 CLEC10AQ8IUN9 316 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 ADGRF2Q8IZF7 708 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 COLGALT1Q8NBJ5 622 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 CCDC54Q8NEL0 328 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 FBXO30Q8TB52 745 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 PIGBQ92521 554 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 ANKRD60Q9BZ19 345 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 LMAN2LQ9H0V9 348 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 MKS1Q9NXB0 559 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 PCDHB7Q9Y5E2 793 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 TEX264Q9Y6I9 313 aa11.49□□□□□ -0.57
U2AF1-209ENST00000475639 FAM86B1E9PN63 330 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 SLC25A27O95847 323 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 FAM86B2P0C5J1 330 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 CYP2B6P20813 491 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 ENDOUP21128 410 aaKnown RBP11.48□□□□□ -0.57
U2AF1-209ENST00000475639 IFITM2Q01629 132 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 EFEMP1Q12805 493 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 NFIAQ12857 509 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 ELAVL2Q12926 359 aaKnown RBP11.48□□□□□ -0.57
U2AF1-209ENST00000475639 KLF10Q13118 480 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms