RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 ECHDC3Q96DC8 303 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 CHFRQ96EP1 664 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 CFAP36Q96G28 342 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 VPS39Q96JC1 886 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 PWWP2AQ96N64 755 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 SMC6Q96SB8 1091 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 GORASP1Q9BQQ3 440 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 DHRS4Q9BTZ2 278 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 GPR63Q9BZJ6 419 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 EPB41L4BQ9H329 900 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 CENPHQ9H3R5 247 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 ZDHHC4Q9NPG8 344 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 CHRAC1Q9NRG0 131 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 NLE1Q9NVX2 485 aaPredicted RBP7.02□□□□□ -1.29
SHQ1-207ENST00000475558 POLR3BQ9NW08 1133 aaPredicted RBP7.02□□□□□ -1.29
SHQ1-207ENST00000475558 SYBUQ9NX95 663 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 TOR4AQ9NXH8 423 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 BCCIPQ9P287 314 aaKnown RBP eCLIP7.02□□□□□ -1.29
SHQ1-207ENST00000475558 DCDC2Q9UHG0 476 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 EVLQ9UI08 416 aaPredicted RBP7.02□□□□□ -1.29
SHQ1-207ENST00000475558 SLCO3A1Q9UIG8 710 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 CHKBQ9Y259 395 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 MSRB2Q9Y3D2 182 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 PCDHGC4Q9Y5F7 938 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 COMMD10Q9Y6G5 202 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 CACNA1EQ15878 2313 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 ASPMQ8IZT6 3477 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 A0A0J9YYE9 177 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 ZCWPW2A0A1B0GU75 182 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 TSPAN11A1L157 253 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 TTC24A2A3L6 582 aaPredicted RBP7.01□□□□□ -1.29
SHQ1-207ENST00000475558 H3BMM5 538 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 PSMD11O00231 422 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 QSOX1O00391 747 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 SCAMP3O14828 347 aaKnown RBP7.01□□□□□ -1.29
SHQ1-207ENST00000475558 MUSKO15146 869 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 SMAD6O43541 496 aaKnown RBP7.01□□□□□ -1.29
SHQ1-207ENST00000475558 LDB2O43679 373 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 USP12O75317 370 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 ZNF821O75541 412 aaPredicted RBP7.01□□□□□ -1.29
SHQ1-207ENST00000475558 TRIM16O95361 564 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 PRLP01236 227 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 TRBC1P01850 177 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 MPOP05164 745 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 COL6A2P12110 1019 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 OGNP20774 298 aaKnown RBP7.01□□□□□ -1.29
SHQ1-207ENST00000475558 CD9P21926 228 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 CRABP2P29373 138 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 SLC26A3P40879 764 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 OPRD1P41143 372 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 SKIV2L2P42285 1042 aaKnown RBP7.01□□□□□ -1.29
SHQ1-207ENST00000475558 DPP6P42658 865 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 SLC6A11P48066 632 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 DHPSP49366 369 aaPredicted RBP7.01□□□□□ -1.29
SHQ1-207ENST00000475558 TTPAP49638 278 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 ENPP2Q13822 863 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 ARHGEF7Q14155 803 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 POU6F1Q14863 301 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 CNGA3Q16281 694 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 CRY1Q16526 586 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 INSCQ1MX18 579 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 KBTBD12Q3ZCT8 623 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 FNDC3BQ53EP0 1204 aaKnown RBP7.01□□□□□ -1.29
SHQ1-207ENST00000475558 FASTKD1Q53R41 847 aaKnown RBP7.01□□□□□ -1.29
SHQ1-207ENST00000475558 EOGTQ5NDL2 527 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 UGT3A1Q6NUS8 523 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 LEKR1Q6ZMV7 388 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 DPY19L3Q6ZPD9 716 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 GLT6D1Q7Z4J2 308 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 TTC7BQ86TV6 843 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 KCNMB4Q86W47 210 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 RASSF3Q86WH2 238 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 IGDCC3Q8IVU1 814 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 NRSN1Q8IZ57 195 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 PPM1NQ8N819 430 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 DEFB124Q8NES8 71 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 OR4L1Q8NH43 312 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 RIN3Q8TB24 985 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 BLOC1S5Q8TDH9 187 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 PDCD6IPQ8WUM4 868 aaKnown RBP7.01□□□□□ -1.29
SHQ1-207ENST00000475558 PIGKQ92643 395 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 ZNF669Q96BR6 464 aaPredicted RBP7.01□□□□□ -1.29
SHQ1-207ENST00000475558 CENPTQ96BT3 561 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 ULK4Q96C45 1275 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 TLCD1Q96CP7 247 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 TSPAN17Q96FV3 270 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 MYO19Q96H55 970 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 CDKN2AIPNLQ96HQ2 116 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 RPL10LQ96L21 214 aaKnown RBP7.01□□□□□ -1.29
SHQ1-207ENST00000475558 MRGPRX3Q96LB0 322 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 MCCC1Q96RQ3 725 aaPredicted RBP7.01□□□□□ -1.29
SHQ1-207ENST00000475558 PAFAH2Q99487 392 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 NUSAP1Q9BXS6 441 aaKnown RBP7.01□□□□□ -1.29
SHQ1-207ENST00000475558 HDAC8Q9BY41 377 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 TPSD1Q9BZJ3 242 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 TMEM245Q9H330 911 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 TREX1Q9NSU2 369 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 INTS10Q9NVR2 710 aaKnown RBP7.01□□□□□ -1.29
SHQ1-207ENST00000475558 PPM1HQ9ULR3 514 aa7.01□□□□□ -1.29
SHQ1-207ENST00000475558 INVSQ9Y283 1065 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms