RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 MMABQ96EY8 250 aaPredicted RBP6.26□□□□□ -1.41
SMC5-203ENST00000475540 UBA5Q9GZZ9 404 aa6.26□□□□□ -1.41
SMC5-203ENST00000475540 SLC28A3Q9HAS3 691 aa6.26□□□□□ -1.41
SMC5-203ENST00000475540 PLEKHA5Q9HAU0 1116 aa6.26□□□□□ -1.41
SMC5-203ENST00000475540 ABI3Q9P2A4 366 aa6.26□□□□□ -1.41
SMC5-203ENST00000475540 CNOT8Q9UFF9 292 aaKnown RBP6.26□□□□□ -1.41
SMC5-203ENST00000475540 ZNF711Q9Y462 761 aa6.26□□□□□ -1.41
SMC5-203ENST00000475540 A0A0B4J293 547 aa6.25□□□□□ -1.41
SMC5-203ENST00000475540 C16orf97H3BN30 126 aa6.25□□□□□ -1.41
SMC5-203ENST00000475540 XPNPEP2O43895 674 aa6.25□□□□□ -1.41
SMC5-203ENST00000475540 CRYAAP02489 173 aa6.25□□□□□ -1.41
SMC5-203ENST00000475540 HSPA1AP0DMV8 641 aaKnown RBP6.25□□□□□ -1.41
SMC5-203ENST00000475540 HSPA1BP0DMV9 641 aaKnown RBP6.25□□□□□ -1.41
SMC5-203ENST00000475540 CETPP11597 493 aa6.25□□□□□ -1.41
SMC5-203ENST00000475540 HOXC9P31274 260 aa6.25□□□□□ -1.41
SMC5-203ENST00000475540 FASLGP48023 281 aa6.25□□□□□ -1.41
SMC5-203ENST00000475540 EEF1A1P68104 462 aaKnown RBP6.25□□□□□ -1.41
SMC5-203ENST00000475540 GOLGA8DPQ0D2H9 430 aa6.25□□□□□ -1.41
SMC5-203ENST00000475540 ZNF628Q5EBL2 1059 aa6.25□□□□□ -1.41
SMC5-203ENST00000475540 EEF1A1P5Q5VTE0 462 aa6.25□□□□□ -1.41
SMC5-203ENST00000475540 BEST3Q8N1M1 668 aa6.25□□□□□ -1.41
SMC5-203ENST00000475540 OR13A1Q8NGR1 328 aa6.25□□□□□ -1.41
SMC5-203ENST00000475540 APBB2Q92870 758 aa6.25□□□□□ -1.41
SMC5-203ENST00000475540 RRNAD1Q96FB5 475 aaKnown RBP6.25□□□□□ -1.41
SMC5-203ENST00000475540 GRAMD2BQ96HH9 432 aa6.25□□□□□ -1.41
SMC5-203ENST00000475540 QRFPRQ96P65 431 aa6.25□□□□□ -1.41
SMC5-203ENST00000475540 CSTL1Q9H114 145 aa6.25□□□□□ -1.41
SMC5-203ENST00000475540 UNC45AQ9H3U1 944 aa6.25□□□□□ -1.41
SMC5-203ENST00000475540 RALYQ9UKM9 306 aaKnown RBP6.25□□□□□ -1.41
SMC5-203ENST00000475540 MAU2Q9Y6X3 613 aa6.25□□□□□ -1.41
SMC5-203ENST00000475540 HLA-DOBP13765 273 aa6.24□□□□□ -1.41
SMC5-203ENST00000475540 MYOD1P15172 320 aa6.24□□□□□ -1.41
SMC5-203ENST00000475540 BSGP35613 385 aa6.24□□□□□ -1.41
SMC5-203ENST00000475540 STPG1Q5TH74 334 aa6.24□□□□□ -1.41
SMC5-203ENST00000475540 CCDC70Q6NSX1 233 aa6.24□□□□□ -1.41
SMC5-203ENST00000475540 BRAT1Q6PJG6 821 aa6.24□□□□□ -1.41
SMC5-203ENST00000475540 CPLX4Q7Z7G2 160 aa6.24□□□□□ -1.41
SMC5-203ENST00000475540 METTL27Q8N6F8 245 aaPredicted RBP6.24□□□□□ -1.41
SMC5-203ENST00000475540 TMEM116Q8NCL8 245 aa6.24□□□□□ -1.41
SMC5-203ENST00000475540 BBS10Q8TAM1 723 aa6.24□□□□□ -1.41
SMC5-203ENST00000475540 KCNG4Q8TDN1 519 aa6.24□□□□□ -1.41
SMC5-203ENST00000475540 PIGTQ969N2 578 aa6.24□□□□□ -1.41
SMC5-203ENST00000475540 PPP1R13BQ96KQ4 1090 aa6.24□□□□□ -1.41
SMC5-203ENST00000475540 SEBOXQ9HB31 216 aaPredicted RBP6.24□□□□□ -1.41
SMC5-203ENST00000475540 LTB4R2Q9NPC1 389 aa6.24□□□□□ -1.41
SMC5-203ENST00000475540 ABCF3Q9NUQ8 709 aa6.24□□□□□ -1.41
SMC5-203ENST00000475540 ACSL5Q9ULC5 683 aa6.24□□□□□ -1.41
SMC5-203ENST00000475540 LINC01565O15544 149 aa6.23□□□□□ -1.41
SMC5-203ENST00000475540 GRID2O43424 1007 aa6.23□□□□□ -1.41
SMC5-203ENST00000475540 JRKO75564 520 aa6.23□□□□□ -1.41
SMC5-203ENST00000475540 SLC25A12O75746 678 aa6.23□□□□□ -1.41
SMC5-203ENST00000475540 TMEM63AO94886 807 aa6.23□□□□□ -1.41
SMC5-203ENST00000475540 IPO7O95373 1038 aaKnown RBP6.23□□□□□ -1.41
SMC5-203ENST00000475540 UMODP07911 640 aa6.23□□□□□ -1.41
SMC5-203ENST00000475540 ITGA2P17301 1181 aa6.23□□□□□ -1.41
SMC5-203ENST00000475540 TERF1P54274 439 aa6.23□□□□□ -1.41
SMC5-203ENST00000475540 F2RL1P55085 397 aa6.23□□□□□ -1.41
SMC5-203ENST00000475540 CSTF3Q12996 717 aaKnown RBP6.23□□□□□ -1.41
SMC5-203ENST00000475540 DECR1Q16698 335 aa6.23□□□□□ -1.41
SMC5-203ENST00000475540 TSTQ16762 297 aaKnown RBP6.23□□□□□ -1.41
SMC5-203ENST00000475540 TTI2Q6NXR4 508 aa6.23□□□□□ -1.41
SMC5-203ENST00000475540 USP43Q70EL4 1123 aa6.23□□□□□ -1.41
SMC5-203ENST00000475540 SLC9B2Q86UD5 537 aa6.23□□□□□ -1.41
SMC5-203ENST00000475540 GPR180Q86V85 440 aa6.23□□□□□ -1.41
SMC5-203ENST00000475540 TICAM2Q86XR7 235 aa6.23□□□□□ -1.41
SMC5-203ENST00000475540 IL17RCQ8NAC3 791 aa6.23□□□□□ -1.41
SMC5-203ENST00000475540 HES6Q96HZ4 224 aa6.23□□□□□ -1.41
SMC5-203ENST00000475540 FKRPQ9H9S5 495 aa6.23□□□□□ -1.41
SMC5-203ENST00000475540 SCPEP1Q9HB40 452 aa6.23□□□□□ -1.41
SMC5-203ENST00000475540 KLHL1Q9NR64 748 aa6.23□□□□□ -1.41
SMC5-203ENST00000475540 A0A087WYN8 130 aa6.22□□□□□ -1.41
SMC5-203ENST00000475540 HS3ST1O14792 307 aa6.22□□□□□ -1.41
SMC5-203ENST00000475540 UBA1P22314 1058 aaKnown RBP6.22□□□□□ -1.41
SMC5-203ENST00000475540 RGS2P41220 211 aa6.22□□□□□ -1.41
SMC5-203ENST00000475540 FMO5P49326 533 aa6.22□□□□□ -1.41
SMC5-203ENST00000475540 TAS2R38P59533 333 aa6.22□□□□□ -1.41
SMC5-203ENST00000475540 MAD2L1Q13257 205 aaPredicted RBP6.22□□□□□ -1.41
SMC5-203ENST00000475540 GTF2H2Q13888 395 aa6.22□□□□□ -1.41
SMC5-203ENST00000475540 RALBP1Q15311 655 aa6.22□□□□□ -1.41
SMC5-203ENST00000475540 TBCEQ15813 527 aaPredicted RBP6.22□□□□□ -1.41
SMC5-203ENST00000475540 CCDC96Q2M329 555 aa6.22□□□□□ -1.41
SMC5-203ENST00000475540 TMEM35AQ53FP2 167 aa6.22□□□□□ -1.41
SMC5-203ENST00000475540 ZNF280DQ6N043 979 aa6.22□□□□□ -1.41
SMC5-203ENST00000475540 GTF2H2CQ6P1K8 395 aa6.22□□□□□ -1.41
SMC5-203ENST00000475540 DSG4Q86SJ6 1040 aa6.22□□□□□ -1.41
SMC5-203ENST00000475540 ZNF329Q86UD4 541 aa6.22□□□□□ -1.41
SMC5-203ENST00000475540 SRBD1Q8N5C6 995 aaKnown RBP6.22□□□□□ -1.41
SMC5-203ENST00000475540 HMGCLL1Q8TB92 370 aa6.22□□□□□ -1.41
SMC5-203ENST00000475540 DNAAF4Q8WXU2 420 aa6.22□□□□□ -1.41
SMC5-203ENST00000475540 TAAR8Q969N4 342 aa6.22□□□□□ -1.41
SMC5-203ENST00000475540 RHBDF1Q96CC6 855 aa6.22□□□□□ -1.41
SMC5-203ENST00000475540 ARHGEF26Q96DR7 871 aa6.22□□□□□ -1.41
SMC5-203ENST00000475540 SYT17Q9BSW7 474 aa6.22□□□□□ -1.41
SMC5-203ENST00000475540 RANGRFQ9HD47 186 aaPredicted RBP6.22□□□□□ -1.41
SMC5-203ENST00000475540 OR14J1Q9UGF5 321 aa6.22□□□□□ -1.41
SMC5-203ENST00000475540 LIMA1Q9UHB6 759 aaKnown RBP6.22□□□□□ -1.41
SMC5-203ENST00000475540 FBXL2Q9UKC9 423 aa6.22□□□□□ -1.41
SMC5-203ENST00000475540 KLHL20Q9Y2M5 609 aa6.22□□□□□ -1.41
SMC5-203ENST00000475540 KCNE2Q9Y6J6 123 aa6.22□□□□□ -1.41
SMC5-203ENST00000475540 PTPRCP08575 1304 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms