RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 NR6A1Q15406 480 aa14.05□□□□□ -0.16
ATG9A-220ENST00000475339 FAM72AQ5TYM5 149 aa14.05□□□□□ -0.16
ATG9A-220ENST00000475339 MANEALQ5VSG8 457 aa14.05□□□□□ -0.16
ATG9A-220ENST00000475339 SP5Q6BEB4 398 aaPredicted RBP14.05□□□□□ -0.16
ATG9A-220ENST00000475339 FAM72DQ6L9T8 149 aa14.05□□□□□ -0.16
ATG9A-220ENST00000475339 TTC7BQ86TV6 843 aa14.05□□□□□ -0.16
ATG9A-220ENST00000475339 FAM72BQ86X60 149 aa14.05□□□□□ -0.16
ATG9A-220ENST00000475339 ZNF354CQ86Y25 554 aa14.05□□□□□ -0.16
ATG9A-220ENST00000475339 PYROXD2Q8N2H3 581 aa14.05□□□□□ -0.16
ATG9A-220ENST00000475339 RYBPQ8N488 228 aaPredicted RBP14.05□□□□□ -0.16
ATG9A-220ENST00000475339 OR7D4Q8NG98 312 aa14.05□□□□□ -0.16
ATG9A-220ENST00000475339 CXorf40AQ8TE69 158 aa14.05□□□□□ -0.16
ATG9A-220ENST00000475339 RNF31Q96EP0 1072 aa14.05□□□□□ -0.16
ATG9A-220ENST00000475339 SPON2Q9BUD6 331 aa14.05□□□□□ -0.16
ATG9A-220ENST00000475339 TM6SF2Q9BZW4 377 aa14.05□□□□□ -0.16
ATG9A-220ENST00000475339 CEP44Q9C0F1 390 aa14.05□□□□□ -0.16
ATG9A-220ENST00000475339 DHX35Q9H5Z1 703 aaKnown RBP14.05□□□□□ -0.16
ATG9A-220ENST00000475339 RETREG1Q9H6L5 497 aa14.05□□□□□ -0.16
ATG9A-220ENST00000475339 CATSPERBQ9H7T0 1116 aa14.05□□□□□ -0.16
ATG9A-220ENST00000475339 ATP13A1Q9HD20 1204 aa14.05□□□□□ -0.16
ATG9A-220ENST00000475339 APMAPQ9HDC9 416 aa14.05□□□□□ -0.16
ATG9A-220ENST00000475339 SPATS2LQ9NUQ6 558 aaKnown RBP14.05□□□□□ -0.16
ATG9A-220ENST00000475339 UVRAGQ9P2Y5 699 aa14.05□□□□□ -0.16
ATG9A-220ENST00000475339 COQ6Q9Y2Z9 468 aa14.05□□□□□ -0.16
ATG9A-220ENST00000475339 ACTL7AQ9Y615 435 aa14.05□□□□□ -0.16
ATG9A-220ENST00000475339 CROCCQ5TZA2 2017 aa14.05□□□□□ -0.16
ATG9A-220ENST00000475339 CHD5Q8TDI0 1954 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 GOLGA6L6A8MZA4 724 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 EIF3CLB5ME19 914 aaKnown RBP14.04□□□□□ -0.16
ATG9A-220ENST00000475339 FGF10O15520 208 aaPredicted RBP14.04□□□□□ -0.16
ATG9A-220ENST00000475339 DAPK3O43293 454 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 KRT86O43790 486 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 RAMP2O60895 175 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 LRCH4O75427 683 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 CBX6O95503 412 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 UGT2B4P06133 528 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 TMEM253P0C7T8 217 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 TIMP2P16035 220 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 HTR7P34969 479 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 PCK1P35558 622 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 MC2RQ01718 297 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 GNA12Q03113 381 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 ASTE1Q2TB18 679 aaPredicted RBP14.04□□□□□ -0.16
ATG9A-220ENST00000475339 ZRANB3Q5FWF4 1079 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 ERMARDQ5T6L9 678 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 CEACAM20Q6UY09 585 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 C17orf82Q86X59 251 aaPredicted RBP14.04□□□□□ -0.16
ATG9A-220ENST00000475339 APLFQ8IW19 511 aaPredicted RBP14.04□□□□□ -0.16
ATG9A-220ENST00000475339 TC2NQ8N9U0 490 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 Q8NA96 180 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 ATL2Q8NHH9 583 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 VOPP1Q96AW1 172 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 C19orf60Q96EN9 201 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 EIF3CQ99613 913 aaKnown RBP14.04□□□□□ -0.16
ATG9A-220ENST00000475339 SNRNP25Q9BV90 132 aaKnown RBP14.04□□□□□ -0.16
ATG9A-220ENST00000475339 PACSIN1Q9BY11 444 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 MFRPQ9BY79 579 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 FGF22Q9HCT0 170 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 TMEM248Q9NWD8 314 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 GPATCH2LQ9NWQ4 482 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 RCOR3Q9P2K3 495 aaPredicted RBP14.04□□□□□ -0.16
ATG9A-220ENST00000475339 DNAI1Q9UI46 699 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 LCMT1Q9UIC8 334 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 PHTF1Q9UMS5 762 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 NENFQ9UMX5 172 aa14.04□□□□□ -0.16
ATG9A-220ENST00000475339 ANKHD1Q8IWZ3 2542 aaKnown RBP14.04□□□□□ -0.16
ATG9A-220ENST00000475339 TMEM202A6NGA9 273 aa14.03□□□□□ -0.16
ATG9A-220ENST00000475339 EEF2KO00418 725 aaKnown RBP14.03□□□□□ -0.16
ATG9A-220ENST00000475339 ZW10O43264 779 aa14.03□□□□□ -0.16
ATG9A-220ENST00000475339 KATNA1O75449 491 aa14.03□□□□□ -0.16
ATG9A-220ENST00000475339 ZMPSTE24O75844 475 aa14.03□□□□□ -0.16
ATG9A-220ENST00000475339 DLGAP3O95886 979 aa14.03□□□□□ -0.16
ATG9A-220ENST00000475339 CYLC1P35663 651 aaPredicted RBP14.03□□□□□ -0.16
ATG9A-220ENST00000475339 SEMA5AQ13591 1074 aa14.03□□□□□ -0.16
ATG9A-220ENST00000475339 PPP6R3Q5H9R7 873 aaPredicted RBP14.03□□□□□ -0.16
ATG9A-220ENST00000475339 RETSATQ6NUM9 610 aa14.03□□□□□ -0.16
ATG9A-220ENST00000475339 JMJD6Q6NYC1 403 aaPredicted RBP14.03□□□□□ -0.16
ATG9A-220ENST00000475339 PSTKQ8IV42 348 aaKnown RBP14.03□□□□□ -0.16
ATG9A-220ENST00000475339 ESX1Q8N693 406 aa14.03□□□□□ -0.16
ATG9A-220ENST00000475339 NIPA2Q8N8Q9 360 aa14.03□□□□□ -0.16
ATG9A-220ENST00000475339 RTL3Q8N8U3 475 aaKnown RBP14.03□□□□□ -0.16
ATG9A-220ENST00000475339 KIAA1524Q8TCG1 905 aa14.03□□□□□ -0.16
ATG9A-220ENST00000475339 BTBD6Q96KE9 485 aa14.03□□□□□ -0.16
ATG9A-220ENST00000475339 KLHL32Q96NJ5 620 aa14.03□□□□□ -0.16
ATG9A-220ENST00000475339 PEBP4Q96S96 227 aa14.03□□□□□ -0.16
ATG9A-220ENST00000475339 SLC25A23Q9BV35 468 aa14.03□□□□□ -0.16
ATG9A-220ENST00000475339 MAGEB5Q9BZ81 275 aa14.03□□□□□ -0.16
ATG9A-220ENST00000475339 ZWILCHQ9H900 591 aa14.03□□□□□ -0.16
ATG9A-220ENST00000475339 SLAMF7Q9NQ25 335 aa14.03□□□□□ -0.16
ATG9A-220ENST00000475339 LUC7LQ9NQ29 371 aaKnown RBP14.03□□□□□ -0.16
ATG9A-220ENST00000475339 CROTQ9UKG9 612 aa14.03□□□□□ -0.16
ATG9A-220ENST00000475339 HPCAL4Q9UM19 191 aa14.03□□□□□ -0.16
ATG9A-220ENST00000475339 IGHV1OR21-1A0A087WYE8 117 aa14.02□□□□□ -0.17
ATG9A-220ENST00000475339 A8MU76 341 aa14.02□□□□□ -0.17
ATG9A-220ENST00000475339 KRIT1O00522 736 aa14.02□□□□□ -0.17
ATG9A-220ENST00000475339 INPP4BO15327 924 aa14.02□□□□□ -0.17
ATG9A-220ENST00000475339 IPO7O95373 1038 aaKnown RBP14.02□□□□□ -0.17
ATG9A-220ENST00000475339 ECEL1O95672 775 aa14.02□□□□□ -0.17
ATG9A-220ENST00000475339 PCCBP05166 539 aa14.02□□□□□ -0.17
ATG9A-220ENST00000475339 FGF1P05230 155 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms