RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 HADHAP40939 763 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 GCLMP48507 274 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 RGS7P49802 495 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 RPL14P50914 215 aaKnown RBP4.09□□□□□ -1.75
USP16-205ENST00000474835 RACK1P63244 317 aaKnown RBP4.09□□□□□ -1.75
USP16-205ENST00000474835 USP17L24Q0WX57 530 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 ESCO2Q56NI9 601 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 C10orf91Q5T1B1 145 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 C6orf183Q5T699 404 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 SLC30A6Q6NXT4 461 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 TXNDC11Q6PKC3 985 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 USP17L6PQ6QN14 398 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 NSMFQ6X4W1 530 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 RFX8Q6ZV50 586 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 B3GNT8Q7Z7M8 397 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 CCDC25Q86WR0 208 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 EID3Q8N140 333 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 SIX6OS1Q8N1H7 587 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 EFCAB3Q8N7B9 438 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 TSGA13Q96PP4 275 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 KLF6Q99612 283 aaPredicted RBP4.09□□□□□ -1.75
USP16-205ENST00000474835 FAM118BQ9BPY3 351 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 FUZQ9BT04 418 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 C9orf16Q9BUW7 83 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 ARHGAP39Q9C0H5 1083 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 MKRN2Q9H000 416 aaKnown RBP4.09□□□□□ -1.75
USP16-205ENST00000474835 FAM49AQ9H0Q0 323 aaPredicted RBP4.09□□□□□ -1.75
USP16-205ENST00000474835 PCDHAC1Q9H158 963 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 RPAP3Q9H6T3 665 aaPredicted RBP4.09□□□□□ -1.75
USP16-205ENST00000474835 ZFP64Q9NPA5 681 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 SPAG4Q9NPE6 437 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 MRPL40Q9NQ50 206 aaKnown RBP4.09□□□□□ -1.75
USP16-205ENST00000474835 SNX15Q9NRS6 342 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 PRMT7Q9NVM4 692 aaPredicted RBP4.09□□□□□ -1.75
USP16-205ENST00000474835 COA4Q9NYJ1 87 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 SEPT10Q9P0V9 454 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 TRMT112Q9UI30 125 aaKnown RBP4.09□□□□□ -1.75
USP16-205ENST00000474835 PLXND1Q9Y4D7 1925 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 A8MXK9 166 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 HACD1B0YJ81 288 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 AURKAO14965 403 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 DLX3O60479 287 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 RGS20O76081 388 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 MAP3K6O95382 1288 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 STARD3NLO95772 234 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 CALB1P05937 261 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 SERPINF2P08697 491 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 HOXC6P09630 235 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 CDH1P12830 882 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 CKMT2P17540 419 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 DNAJB2P25686 324 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 MAP4P27816 1152 aaKnown RBP4.09□□□□□ -1.75
USP16-205ENST00000474835 HOXC13P31276 330 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 CRKLP46109 303 aaKnown RBP4.09□□□□□ -1.75
USP16-205ENST00000474835 MECP2P51608 486 aaKnown RBP4.09□□□□□ -1.75
USP16-205ENST00000474835 EEFSECP57772 596 aaKnown RBP4.09□□□□□ -1.75
USP16-205ENST00000474835 TGFB2P61812 414 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 FZD5Q13467 585 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 DSG2Q14126 1118 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 FLYWCH1Q4VC44 716 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 FAM205BPQ63HN1 556 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 DESI1Q6ICB0 168 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 FRMPD2BQ6IN97 320 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 TMEM107Q6UX40 140 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 OVCH2Q7RTZ1 564 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 C14orf80Q86SX3 495 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 CBR4Q8N4T8 237 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 LINC00469Q8N7U9 141 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 FAM83FQ8NEG4 500 aaPredicted RBP4.09□□□□□ -1.75
USP16-205ENST00000474835 LPCAT1Q8NF37 534 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 SLC7A6Q92536 515 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 CDKL2Q92772 493 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 KIAA1143Q96AT1 154 aaPredicted RBP4.09□□□□□ -1.75
USP16-205ENST00000474835 ZBED3Q96IU2 234 aaPredicted RBP4.09□□□□□ -1.75
USP16-205ENST00000474835 FAM193BQ96PV7 902 aaPredicted RBP4.09□□□□□ -1.75
USP16-205ENST00000474835 C11orf70Q9BRQ4 267 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 C2orf49Q9BVC5 232 aaPredicted RBP4.09□□□□□ -1.75
USP16-205ENST00000474835 BARHL1Q9BZE3 327 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 ASPSCR1Q9BZE9 553 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 RAD21L1Q9H4I0 556 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 TMEM134Q9H6X4 195 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 NOL11Q9H8H0 719 aaKnown RBP4.09□□□□□ -1.75
USP16-205ENST00000474835 RSAD1Q9HA92 442 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 HMG20AQ9NP66 347 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 ACOT13Q9NPJ3 140 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 CD93Q9NPY3 652 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.09□□□□□ -1.75
USP16-205ENST00000474835 TBC1D14Q9P2M4 693 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 TJP2Q9UDY2 1190 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 ZNF225Q9UK10 706 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 A8MU76 341 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 I6L893 689 aaPredicted RBP4.09□□□□□ -1.76
USP16-205ENST00000474835 GOLGA8RI6L899 631 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 K7ENM7 598 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 UBXN8O00124 270 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 PPEF1O14829 653 aaPredicted RBP4.09□□□□□ -1.76
USP16-205ENST00000474835 GIPC1O14908 333 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 DCLK1O15075 740 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 B4GAT1O43505 415 aa4.09□□□□□ -1.76
USP16-205ENST00000474835 KRT37O76014 449 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms