RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 TPM1P09493 284 aa18.46■□□□□ 0.55
COL7A1-209ENST00000474432 HGFP14210 728 aa18.46■□□□□ 0.55
COL7A1-209ENST00000474432 COMTP21964 271 aa18.46■□□□□ 0.55
COL7A1-209ENST00000474432 UGT1A5P35504 534 aa18.46■□□□□ 0.55
COL7A1-209ENST00000474432 MLLT3P42568 568 aaPredicted RBP18.46■□□□□ 0.55
COL7A1-209ENST00000474432 SLC1A1P43005 524 aa18.46■□□□□ 0.55
COL7A1-209ENST00000474432 NOP2P46087 812 aaKnown RBP18.46■□□□□ 0.55
COL7A1-209ENST00000474432 SPINT3P49223 89 aa18.46■□□□□ 0.55
COL7A1-209ENST00000474432 HADHBP55084 474 aaKnown RBP18.46■□□□□ 0.55
COL7A1-209ENST00000474432 ADCY2Q08462 1091 aa18.46■□□□□ 0.55
COL7A1-209ENST00000474432 HENMT1Q5T8I9 393 aaKnown RBP18.46■□□□□ 0.55
COL7A1-209ENST00000474432 FOXR1Q6PIV2 292 aa18.46■□□□□ 0.55
COL7A1-209ENST00000474432 SLC30A9Q6PML9 568 aa18.46■□□□□ 0.55
COL7A1-209ENST00000474432 RAB11FIP2Q7L804 512 aa18.46■□□□□ 0.55
COL7A1-209ENST00000474432 RHOT1Q8IXI2 618 aa18.46■□□□□ 0.55
COL7A1-209ENST00000474432 KIAA1524Q8TCG1 905 aa18.46■□□□□ 0.55
COL7A1-209ENST00000474432 KCNE4Q8WWG9 221 aa18.46■□□□□ 0.55
COL7A1-209ENST00000474432 BRD8Q9H0E9 1235 aa18.46■□□□□ 0.55
COL7A1-209ENST00000474432 GOLPH3Q9H4A6 298 aa18.46■□□□□ 0.55
COL7A1-209ENST00000474432 DNPEPQ9ULA0 475 aa18.46■□□□□ 0.55
COL7A1-209ENST00000474432 TFR2Q9UP52 801 aa18.46■□□□□ 0.55
COL7A1-209ENST00000474432 PLD2O14939 933 aa18.45■□□□□ 0.54
COL7A1-209ENST00000474432 PPM1DO15297 605 aa18.45■□□□□ 0.54
COL7A1-209ENST00000474432 INPP4BO15327 924 aa18.45■□□□□ 0.54
COL7A1-209ENST00000474432 DNAJC6O75061 913 aa18.45■□□□□ 0.54
COL7A1-209ENST00000474432 LCA5LO95447 670 aa18.45■□□□□ 0.54
COL7A1-209ENST00000474432 ITGA2BP08514 1039 aa18.45■□□□□ 0.54
COL7A1-209ENST00000474432 CA4P22748 312 aa18.45■□□□□ 0.54
COL7A1-209ENST00000474432 CDKN2BP42772 138 aa18.45■□□□□ 0.54
COL7A1-209ENST00000474432 OR1D5P58170 312 aa18.45■□□□□ 0.54
COL7A1-209ENST00000474432 AP1B1Q10567 949 aa18.45■□□□□ 0.54
COL7A1-209ENST00000474432 GALNT3Q14435 633 aa18.45■□□□□ 0.54
COL7A1-209ENST00000474432 ZNF574Q6ZN55 896 aaPredicted RBP18.45■□□□□ 0.54
COL7A1-209ENST00000474432 GPR155Q7Z3F1 870 aa18.45■□□□□ 0.54
COL7A1-209ENST00000474432 FBXO39Q8N4B4 442 aa18.45■□□□□ 0.54
COL7A1-209ENST00000474432 EXD1Q8NHP7 514 aa18.45■□□□□ 0.54
COL7A1-209ENST00000474432 ZNF830Q96NB3 372 aaPredicted RBP18.45■□□□□ 0.54
COL7A1-209ENST00000474432 OR2M4Q96R27 311 aa18.45■□□□□ 0.54
COL7A1-209ENST00000474432 UBL7Q96S82 380 aaPredicted RBP18.45■□□□□ 0.54
COL7A1-209ENST00000474432 MLPHQ9BV36 600 aaPredicted RBP18.45■□□□□ 0.54
COL7A1-209ENST00000474432 DPH1Q9BZG8 443 aa18.45■□□□□ 0.54
COL7A1-209ENST00000474432 CPNE5Q9HCH3 593 aa18.45■□□□□ 0.54
COL7A1-209ENST00000474432 SAE1Q9UBE0 346 aaPredicted RBP18.45■□□□□ 0.54
COL7A1-209ENST00000474432 C1orf232A0A0U1RR37 186 aa18.44■□□□□ 0.54
COL7A1-209ENST00000474432 KLK10O43240 276 aa18.44■□□□□ 0.54
COL7A1-209ENST00000474432 EML2O95834 649 aa18.44■□□□□ 0.54
COL7A1-209ENST00000474432 ATP1A1P05023 1023 aaKnown RBP18.44■□□□□ 0.54
COL7A1-209ENST00000474432 DYNLT1P63172 113 aa18.44■□□□□ 0.54
COL7A1-209ENST00000474432 CXADRP78310 365 aa18.44■□□□□ 0.54
COL7A1-209ENST00000474432 CLN3Q13286 438 aa18.44■□□□□ 0.54
COL7A1-209ENST00000474432 EIF3IQ13347 325 aaKnown RBP18.44■□□□□ 0.54
COL7A1-209ENST00000474432 PDK1Q15118 436 aa18.44■□□□□ 0.54
COL7A1-209ENST00000474432 PRKD1Q15139 912 aaPredicted RBP18.44■□□□□ 0.54
COL7A1-209ENST00000474432 MARK2Q7KZI7 788 aaKnown RBP18.44■□□□□ 0.54
COL7A1-209ENST00000474432 LYSMD3Q7Z3D4 306 aa18.44■□□□□ 0.54
COL7A1-209ENST00000474432 RFX6Q8HWS3 928 aa18.44■□□□□ 0.54
COL7A1-209ENST00000474432 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.44■□□□□ 0.54
COL7A1-209ENST00000474432 TMEM74Q96NL1 305 aa18.44■□□□□ 0.54
COL7A1-209ENST00000474432 AGAP3Q96P47 875 aa18.44■□□□□ 0.54
COL7A1-209ENST00000474432 SEMA6CQ9H3T2 930 aa18.44■□□□□ 0.54
COL7A1-209ENST00000474432 HAUS2Q9NVX0 235 aa18.44■□□□□ 0.54
COL7A1-209ENST00000474432 DDX56Q9NY93 547 aaKnown RBP18.44■□□□□ 0.54
COL7A1-209ENST00000474432 PCDHGA7Q9Y5G6 932 aa18.44■□□□□ 0.54
COL7A1-209ENST00000474432 ALG6Q9Y672 507 aa18.44■□□□□ 0.54
COL7A1-209ENST00000474432 TMX2-CTNND1H3BSU7 103 aa18.43■□□□□ 0.54
COL7A1-209ENST00000474432 PYGLP06737 847 aa18.43■□□□□ 0.54
COL7A1-209ENST00000474432 TNNT1P13805 278 aa18.43■□□□□ 0.54
COL7A1-209ENST00000474432 PECAM1P16284 738 aaPredicted RBP18.43■□□□□ 0.54
COL7A1-209ENST00000474432 ZFXP17010 805 aaPredicted RBP18.43■□□□□ 0.54
COL7A1-209ENST00000474432 CD1CP29017 333 aa18.43■□□□□ 0.54
COL7A1-209ENST00000474432 ETV5P41161 510 aa18.43■□□□□ 0.54
COL7A1-209ENST00000474432 ACTR1BP42025 376 aa18.43■□□□□ 0.54
COL7A1-209ENST00000474432 ACTR1AP61163 376 aa18.43■□□□□ 0.54
COL7A1-209ENST00000474432 CFHR1Q03591 330 aa18.43■□□□□ 0.54
COL7A1-209ENST00000474432 SPATA22Q8NHS9 363 aa18.43■□□□□ 0.54
COL7A1-209ENST00000474432 SNRNP27Q8WVK2 155 aaKnown RBP18.43■□□□□ 0.54
COL7A1-209ENST00000474432 MAK16Q9BXY0 300 aaKnown RBP18.43■□□□□ 0.54
COL7A1-209ENST00000474432 CDH19Q9H159 772 aa18.43■□□□□ 0.54
COL7A1-209ENST00000474432 SLC25A51Q9H1U9 297 aa18.43■□□□□ 0.54
COL7A1-209ENST00000474432 FAM83DQ9H4H8 585 aa18.43■□□□□ 0.54
COL7A1-209ENST00000474432 RDH14Q9HBH5 336 aa18.43■□□□□ 0.54
COL7A1-209ENST00000474432 VPS18Q9P253 973 aa18.43■□□□□ 0.54
COL7A1-209ENST00000474432 PRKAB1Q9Y478 270 aa18.43■□□□□ 0.54
COL7A1-209ENST00000474432 CFAP46Q8IYW2 2715 aa18.42■□□□□ 0.54
COL7A1-209ENST00000474432 RGSL1A5PLK6 1076 aa18.42■□□□□ 0.54
COL7A1-209ENST00000474432 PPP1R12AO14974 1030 aaPredicted RBP18.42■□□□□ 0.54
COL7A1-209ENST00000474432 ATXN7O15265 892 aaPredicted RBP18.42■□□□□ 0.54
COL7A1-209ENST00000474432 MT-CYBP00156 380 aaPredicted RBP18.42■□□□□ 0.54
COL7A1-209ENST00000474432 PIRTP0C851 137 aa18.42■□□□□ 0.54
COL7A1-209ENST00000474432 ITIH1P19827 911 aa18.42■□□□□ 0.54
COL7A1-209ENST00000474432 PTPN3P26045 913 aa18.42■□□□□ 0.54
COL7A1-209ENST00000474432 SLC5A2P31639 672 aa18.42■□□□□ 0.54
COL7A1-209ENST00000474432 CD68P34810 354 aaPredicted RBP18.42■□□□□ 0.54
COL7A1-209ENST00000474432 MAGEA1P43355 309 aa18.42■□□□□ 0.54
COL7A1-209ENST00000474432 MARCKSL1P49006 195 aa18.42■□□□□ 0.54
COL7A1-209ENST00000474432 WASHC5Q12768 1159 aa18.42■□□□□ 0.54
COL7A1-209ENST00000474432 C16orf72Q14CZ0 275 aa18.42■□□□□ 0.54
COL7A1-209ENST00000474432 LLGL1Q15334 1064 aa18.42■□□□□ 0.54
COL7A1-209ENST00000474432 SLC14A2Q15849 920 aa18.42■□□□□ 0.54
COL7A1-209ENST00000474432 TEX44Q53QW1 395 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms