RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 COPG1Q9Y678 874 aaKnown RBP6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 LAMB1P07942 1786 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 MIF4GDA9UHW6 222 aaKnown RBP6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 FAM47E-STBD1D6RA91 191 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 NOBOXO60393 691 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 PSIP1O75475 530 aaKnown RBP6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 CLPXO76031 633 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 TNFRSF6BO95407 300 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 TUBBP07437 444 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 THRBP10828 461 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 GNAT1P11488 350 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 RAB4AP20338 218 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 SYT1P21579 422 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 CCNE1P24864 410 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 SPAM1P38567 509 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 PTPN9P43378 593 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 HSD17B4P51659 736 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 RAB4BP61018 213 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 TUBB4BP68371 445 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 SPIRE1Q08AE8 756 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 TUBB2AQ13885 445 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 GAMTQ14353 236 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 RPS6KA1Q15418 735 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 BAK1Q16611 211 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 UAP1L1Q3KQV9 507 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 EFHC2Q5JST6 749 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 C9orf152Q5JTZ5 239 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 KCTD11Q693B1 232 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 RINT1Q6NUQ1 792 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 RFPL4BQ6ZWI9 263 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 SLC24A5Q71RS6 500 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 DCXRQ7Z4W1 244 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 GPR65Q8IYL9 337 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 ADGRG2Q8IZP9 1017 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 IQCKQ8N0W5 287 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 OR2T34Q8NGX1 318 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 STYXQ8WUJ0 223 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 GLMPQ8WWB7 406 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 KLHL6Q8WZ60 621 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 MRPS27Q92552 414 aaKnown RBP6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 ATG4CQ96DT6 458 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 IFT43Q96FT9 208 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 RMND5BQ96G75 393 aaPredicted RBP6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 ZNF558Q96NG5 402 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 MED15Q96RN5 788 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 OSMRQ99650 979 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 SEMA3CQ99985 751 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 BDH2Q9BUT1 245 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 TUBB2BQ9BVA1 445 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 CYP3A43Q9HB55 503 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 SLC38A10Q9HBR0 1119 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 SYTL2Q9HCH5 934 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 SEPSECSQ9HD40 501 aaKnown RBP6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 MRPS30Q9NP92 439 aaKnown RBP6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 DCDC2Q9UHG0 476 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 ZNHIT2Q9UHR6 403 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 CPA4Q9UI42 421 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 ANGEL1Q9UNK9 670 aaKnown RBP6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 ERGIC3Q9Y282 383 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 NOX1Q9Y5S8 564 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 HELZ2Q9BYK8 2649 aaKnown RBP6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 OR6C76A6NM76 312 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 SRRM3A6NNA2 597 aaPredicted RBP6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 KBTBD13C9JR72 458 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 KHNYNO15037 678 aaKnown RBP6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 EFSO43281 561 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 NPHS1O60500 1241 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 CABYRO75952 493 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 CCNB2O95067 398 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 NSA2O95478 260 aaKnown RBP6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 AGTP01019 485 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 TGFAP01135 160 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 PKMP14618 531 aaKnown RBP6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 ATF2P15336 505 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 GNSP15586 552 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 YWHAQP27348 245 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 NAGLUP54802 743 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 SELENOVP59797 346 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 BPIFB4P59827 614 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 TAP1Q03518 808 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 OVGP1Q12889 678 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 ABRQ12979 859 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 SRSF5Q13243 272 aaKnown RBP6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 RTN1Q16799 776 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 CCDC58Q4VC31 144 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 ZNF311Q5JNZ3 666 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 RNFT1Q5M7Z0 435 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 BROXQ5VW32 411 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 TBC1D10CQ8IV04 446 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 KLHL36Q8N4N3 616 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 CHST14Q8NCH0 376 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 OR52J3Q8NH60 311 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 UBA3Q8TBC4 463 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 BAHD1Q8TBE0 780 aaPredicted RBP6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 ST7LQ8TDW4 575 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 SMG7Q92540 1137 aaKnown RBP6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 NCSTNQ92542 709 aa6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 NEIL1Q96FI4 390 aaPredicted RBP6.08□□□□□ -1.44
SMARCE1-208ENST00000474246 ZDHHC12Q96GR4 267 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms