RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 AKAP7Q9P0M2 348 aaPredicted RBP20.37■□□□□ 0.85
SNX13-206ENST00000474067 NFKBIL1Q9UBC1 381 aaPredicted RBP20.37■□□□□ 0.85
SNX13-206ENST00000474067 GPSM3Q9Y4H4 160 aa20.37■□□□□ 0.85
SNX13-206ENST00000474067 PCDHGA8Q9Y5G5 932 aa20.37■□□□□ 0.85
SNX13-206ENST00000474067 KMT2BQ9UMN6 2715 aaPredicted RBP20.37■□□□□ 0.85
SNX13-206ENST00000474067 MYLKQ15746 1914 aa20.37■□□□□ 0.85
SNX13-206ENST00000474067 CCDC187A0A096LP49 1063 aa20.36■□□□□ 0.85
SNX13-206ENST00000474067 GOLGA6L9A6NEM1 432 aa20.36■□□□□ 0.85
SNX13-206ENST00000474067 RHPN2P1A8MT19 583 aa20.36■□□□□ 0.85
SNX13-206ENST00000474067 MIF4GDA9UHW6 222 aaKnown RBP20.36■□□□□ 0.85
SNX13-206ENST00000474067 NTN3O00634 580 aaPredicted RBP20.36■□□□□ 0.85
SNX13-206ENST00000474067 PTPN7P35236 360 aa20.36■□□□□ 0.85
SNX13-206ENST00000474067 PCBP4P57723 403 aaKnown RBP20.36■□□□□ 0.85
SNX13-206ENST00000474067 PCSK7Q16549 785 aa20.36■□□□□ 0.85
SNX13-206ENST00000474067 ZNF569Q5MCW4 686 aa20.36■□□□□ 0.85
SNX13-206ENST00000474067 HENMT1Q5T8I9 393 aaKnown RBP20.36■□□□□ 0.85
SNX13-206ENST00000474067 DOK6Q6PKX4 331 aa20.36■□□□□ 0.85
SNX13-206ENST00000474067 PID1Q7Z2X4 250 aa20.36■□□□□ 0.85
SNX13-206ENST00000474067 ZC3H18Q86VM9 953 aaKnown RBP20.36■□□□□ 0.85
SNX13-206ENST00000474067 CCNJLQ8IV13 435 aa20.36■□□□□ 0.85
SNX13-206ENST00000474067 CDKL3Q8IVW4 592 aaPredicted RBP20.36■□□□□ 0.85
SNX13-206ENST00000474067 ZNF248Q8NDW4 579 aa20.36■□□□□ 0.85
SNX13-206ENST00000474067 SCAMP4Q969E2 229 aa20.36■□□□□ 0.85
SNX13-206ENST00000474067 FSD1LQ9BXM9 530 aa20.36■□□□□ 0.85
SNX13-206ENST00000474067 LRRN3Q9H3W5 708 aa20.36■□□□□ 0.85
SNX13-206ENST00000474067 LRIT1Q9P2V4 623 aa20.36■□□□□ 0.85
SNX13-206ENST00000474067 LHX6Q9UPM6 363 aa20.36■□□□□ 0.85
SNX13-206ENST00000474067 USP24Q9UPU5 2620 aa20.35■□□□□ 0.85
SNX13-206ENST00000474067 PJA2O43164 708 aa20.35■□□□□ 0.85
SNX13-206ENST00000474067 ANXA9O76027 345 aa20.35■□□□□ 0.85
SNX13-206ENST00000474067 RPLP0P05388 317 aaKnown RBP20.35■□□□□ 0.85
SNX13-206ENST00000474067 ACTR1BP42025 376 aa20.35■□□□□ 0.85
SNX13-206ENST00000474067 ACTR1AP61163 376 aa20.35■□□□□ 0.85
SNX13-206ENST00000474067 MPP3Q13368 585 aa20.35■□□□□ 0.85
SNX13-206ENST00000474067 GALNT3Q14435 633 aa20.35■□□□□ 0.85
SNX13-206ENST00000474067 HLTFQ14527 1009 aaKnown RBP eCLIP20.35■□□□□ 0.85
SNX13-206ENST00000474067 TCEA2Q15560 299 aa20.35■□□□□ 0.85
SNX13-206ENST00000474067 TTC13Q8NBP0 860 aa20.35■□□□□ 0.85
SNX13-206ENST00000474067 LRRN4Q8WUT4 740 aa20.35■□□□□ 0.85
SNX13-206ENST00000474067 TADA1Q96BN2 335 aa20.35■□□□□ 0.85
SNX13-206ENST00000474067 LIN37Q96GY3 246 aaPredicted RBP20.35■□□□□ 0.85
SNX13-206ENST00000474067 COX14Q96I36 57 aa20.35■□□□□ 0.85
SNX13-206ENST00000474067 DCBLD2Q96PD2 775 aa20.35■□□□□ 0.85
SNX13-206ENST00000474067 QKIQ96PU8 341 aaKnown RBP eCLIP20.35■□□□□ 0.856e-7■■■■□ 21.8
SNX13-206ENST00000474067 FCRL5Q96RD9 977 aa20.35■□□□□ 0.85
SNX13-206ENST00000474067 TRIB3Q96RU7 358 aa20.35■□□□□ 0.85
SNX13-206ENST00000474067 DPYSL5Q9BPU6 564 aa20.35■□□□□ 0.85
SNX13-206ENST00000474067 CEP41Q9BYV8 373 aa20.35■□□□□ 0.85
SNX13-206ENST00000474067 TAAR2Q9P1P5 351 aa20.35■□□□□ 0.85
SNX13-206ENST00000474067 AMFRQ9UKV5 643 aa20.35■□□□□ 0.85
SNX13-206ENST00000474067 ZNF711Q9Y462 761 aa20.35■□□□□ 0.85
SNX13-206ENST00000474067 PCDHB1Q9Y5F3 818 aa20.35■□□□□ 0.85
SNX13-206ENST00000474067 MACROD2A1Z1Q3 448 aa20.34■□□□□ 0.85
SNX13-206ENST00000474067 H7C0C1 242 aa20.34■□□□□ 0.85
SNX13-206ENST00000474067 PPFIA2O75334 1257 aa20.34■□□□□ 0.85
SNX13-206ENST00000474067 SOD1P00441 154 aa20.34■□□□□ 0.85
SNX13-206ENST00000474067 HLA-DPA1P20036 260 aa20.34■□□□□ 0.85
SNX13-206ENST00000474067 ADCY8P40145 1251 aa20.34■□□□□ 0.85
SNX13-206ENST00000474067 EIF2S3P41091 472 aaKnown RBP20.34■□□□□ 0.85
SNX13-206ENST00000474067 GPR3P46089 330 aa20.34■□□□□ 0.85
SNX13-206ENST00000474067 ATP5OP48047 213 aa20.34■□□□□ 0.85
SNX13-206ENST00000474067 INHBCP55103 352 aa20.34■□□□□ 0.85
SNX13-206ENST00000474067 GSDMDP57764 484 aa20.34■□□□□ 0.85
SNX13-206ENST00000474067 PRPSAP1Q14558 356 aa20.34■□□□□ 0.85
SNX13-206ENST00000474067 C3orf38Q5JPI3 329 aa20.34■□□□□ 0.85
SNX13-206ENST00000474067 BROXQ5VW32 411 aa20.34■□□□□ 0.85
SNX13-206ENST00000474067 LYSMD3Q7Z3D4 306 aa20.34■□□□□ 0.85
SNX13-206ENST00000474067 PHYKPLQ8IUZ5 450 aa20.34■□□□□ 0.85
SNX13-206ENST00000474067 PELI3Q8N2H9 469 aa20.34■□□□□ 0.85
SNX13-206ENST00000474067 TRAM1L1Q8N609 369 aa20.34■□□□□ 0.85
SNX13-206ENST00000474067 PLEKHG4BQ96PX9 1271 aa20.34■□□□□ 0.85
SNX13-206ENST00000474067 SPATA16Q9BXB7 569 aa20.34■□□□□ 0.85
SNX13-206ENST00000474067 TSGA10Q9BZW7 698 aa20.34■□□□□ 0.85
SNX13-206ENST00000474067 SUDS3Q9H7L9 328 aaPredicted RBP20.34■□□□□ 0.85
SNX13-206ENST00000474067 CAAP1Q9H8G2 361 aa20.34■□□□□ 0.85
SNX13-206ENST00000474067 RSPH14Q9UHP6 348 aa20.34■□□□□ 0.85
SNX13-206ENST00000474067 ENTPD2Q9Y5L3 495 aa20.34■□□□□ 0.85
SNX13-206ENST00000474067 D6RAR5 112 aa20.33■□□□□ 0.85
SNX13-206ENST00000474067 INPP4BO15327 924 aa20.33■□□□□ 0.85
SNX13-206ENST00000474067 NOBOXO60393 691 aa20.33■□□□□ 0.85
SNX13-206ENST00000474067 PMPCBO75439 489 aa20.33■□□□□ 0.85
SNX13-206ENST00000474067 MPOP05164 745 aa20.33■□□□□ 0.85
SNX13-206ENST00000474067 PECAM1P16284 738 aaPredicted RBP20.33■□□□□ 0.85
SNX13-206ENST00000474067 CCKBRP32239 447 aa20.33■□□□□ 0.85
SNX13-206ENST00000474067 GEMP55040 296 aa20.33■□□□□ 0.85
SNX13-206ENST00000474067 UCNP55089 124 aa20.33■□□□□ 0.85
SNX13-206ENST00000474067 CTBSQ01459 385 aa20.33■□□□□ 0.85
SNX13-206ENST00000474067 NOMO1Q15155 1222 aa20.33■□□□□ 0.85
SNX13-206ENST00000474067 PYCR3Q53H96 274 aa20.33■□□□□ 0.85
SNX13-206ENST00000474067 SLC30A9Q6PML9 568 aa20.33■□□□□ 0.85
SNX13-206ENST00000474067 PEX26Q7Z412 305 aa20.33■□□□□ 0.85
SNX13-206ENST00000474067 TMC3Q7Z5M5 1100 aa20.33■□□□□ 0.85
SNX13-206ENST00000474067 SH3KBP1Q96B97 665 aa20.33■□□□□ 0.85
SNX13-206ENST00000474067 OSBPL8Q9BZF1 889 aa20.33■□□□□ 0.85
SNX13-206ENST00000474067 CARD9Q9H257 536 aa20.33■□□□□ 0.85
SNX13-206ENST00000474067 GOLPH3Q9H4A6 298 aa20.33■□□□□ 0.85
SNX13-206ENST00000474067 SAE1Q9UBE0 346 aaPredicted RBP20.33■□□□□ 0.85
SNX13-206ENST00000474067 ZNHIT2Q9UHR6 403 aa20.33■□□□□ 0.85
SNX13-206ENST00000474067 AAR2Q9Y312 384 aaKnown RBP20.33■□□□□ 0.85
SNX13-206ENST00000474067 IGF2RP11717 2491 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms