RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 OR6C4Q8NGE1 309 aa11.48□□□□□ -0.57
CPNE1-222ENST00000473373 SPATA22Q8NHS9 363 aa11.48□□□□□ -0.57
CPNE1-222ENST00000473373 WDR48Q8TAF3 677 aa11.48□□□□□ -0.57
CPNE1-222ENST00000473373 HTR3CQ8WXA8 447 aa11.48□□□□□ -0.57
CPNE1-222ENST00000473373 IMP4Q96G21 291 aaKnown RBP11.48□□□□□ -0.57
CPNE1-222ENST00000473373 CCDC3Q9BQI4 270 aa11.48□□□□□ -0.57
CPNE1-222ENST00000473373 BOCQ9BWV1 1114 aa11.48□□□□□ -0.57
CPNE1-222ENST00000473373 TEX101Q9BY14 249 aa11.48□□□□□ -0.57
CPNE1-222ENST00000473373 OSBPL8Q9BZF1 889 aa11.48□□□□□ -0.57
CPNE1-222ENST00000473373 FAM83DQ9H4H8 585 aa11.48□□□□□ -0.57
CPNE1-222ENST00000473373 FAM153AQ9UHL3 310 aa11.48□□□□□ -0.57
CPNE1-222ENST00000473373 ZNHIT2Q9UHR6 403 aa11.48□□□□□ -0.57
CPNE1-222ENST00000473373 SUFUQ9UMX1 484 aa11.48□□□□□ -0.57
CPNE1-222ENST00000473373 TMEM98Q9Y2Y6 226 aa11.48□□□□□ -0.57
CPNE1-222ENST00000473373 PCDHA3Q9Y5H8 950 aa11.48□□□□□ -0.57
CPNE1-222ENST00000473373 ACACAQ13085 2346 aa11.48□□□□□ -0.57
CPNE1-222ENST00000473373 IGSF10Q6WRI0 2623 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 RHPN2P1A8MT19 583 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 ZW10O43264 779 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 USP12O75317 370 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 NDST3O95803 873 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 MMP2P08253 660 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 ACTR1BP42025 376 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 POLD2P49005 469 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 EIF3EP60228 445 aaKnown RBP11.47□□□□□ -0.57
CPNE1-222ENST00000473373 ACTR1AP61163 376 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 DPTQ07507 201 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 PRKD1Q15139 912 aaPredicted RBP11.47□□□□□ -0.57
CPNE1-222ENST00000473373 C3orf38Q5JPI3 329 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 ZNF569Q5MCW4 686 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 PERM1Q5SV97 790 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 LRRC69Q6ZNQ3 347 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 RFLNAQ6ZTI6 216 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 NYAP1Q6ZVC0 841 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 ZNF765Q7L2R6 523 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 TECPR1Q7Z6L1 1165 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 GDAP1Q8TB36 358 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 ZDHHC1Q8WTX9 485 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 CCDC74AQ96AQ1 378 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 TEKT5Q96M29 485 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 QKIQ96PU8 341 aaKnown RBP eCLIP11.47□□□□□ -0.57
CPNE1-222ENST00000473373 OR2M4Q96R27 311 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 GFM1Q96RP9 751 aaKnown RBP11.47□□□□□ -0.57
CPNE1-222ENST00000473373 SRPK1Q96SB4 655 aaKnown RBP11.47□□□□□ -0.57
CPNE1-222ENST00000473373 VAT1Q99536 393 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 TSGA10Q9BZW7 698 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 LACRTQ9GZZ8 138 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 RAD18Q9NS91 495 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 ZNF711Q9Y462 761 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 LAMA5O15230 3695 aa11.47□□□□□ -0.57
CPNE1-222ENST00000473373 GRID2IPA4D2P6 1211 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 EIF4E1BA6NMX2 242 aaKnown RBP11.46□□□□□ -0.57
CPNE1-222ENST00000473373 BTNL10A8MVZ5 291 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 KCNN4O15554 427 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 PJA2O43164 708 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 KRT86O43790 486 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 SLC25A14O95258 325 aaPredicted RBP11.46□□□□□ -0.57
CPNE1-222ENST00000473373 FTCDO95954 541 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 PRLP01236 227 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 ATP1A1P05023 1023 aaKnown RBP11.46□□□□□ -0.57
CPNE1-222ENST00000473373 RPLP0P05388 317 aaKnown RBP11.46□□□□□ -0.57
CPNE1-222ENST00000473373 FECHP22830 423 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 AK4P27144 223 aaPredicted RBP11.46□□□□□ -0.57
CPNE1-222ENST00000473373 ACTN2P35609 894 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 SPINT3P49223 89 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 GABREP78334 506 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 OTUD4Q01804 1114 aaKnown RBP11.46□□□□□ -0.57
CPNE1-222ENST00000473373 MAP9Q49MG5 647 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 C14orf28Q4W4Y0 310 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 SEL1L2Q5TEA6 688 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 ADAMTSL4Q6UY14 1074 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 BBS12Q6ZW61 710 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 CCL4L1Q8NHW4 92 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 ACTL9Q8TC94 416 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 BLOC1S5Q8TDH9 187 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 CRELD1Q96HD1 420 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 FAM118BQ9BPY3 351 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 FRMD8Q9BZ67 464 aaPredicted RBP11.46□□□□□ -0.57
CPNE1-222ENST00000473373 NRSN2Q9GZP1 204 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 STN1Q9H668 368 aaKnown RBP11.46□□□□□ -0.57
CPNE1-222ENST00000473373 TRIM10Q9UDY6 481 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 TRHDEQ9UKU6 1024 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 GUCA1BQ9UMX6 200 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 PACSIN2Q9UNF0 486 aaPredicted RBP11.46□□□□□ -0.57
CPNE1-222ENST00000473373 REXO2Q9Y3B8 237 aaKnown RBP11.46□□□□□ -0.57
CPNE1-222ENST00000473373 PCDHB1Q9Y5F3 818 aa11.46□□□□□ -0.57
CPNE1-222ENST00000473373 URB1O60287 2271 aaKnown RBP11.46□□□□□ -0.58
CPNE1-222ENST00000473373 LY6G6EA0A0G2JKS1 128 aa11.45□□□□□ -0.58
CPNE1-222ENST00000473373 MIF4GDA9UHW6 222 aaKnown RBP11.45□□□□□ -0.58
CPNE1-222ENST00000473373 AGRPO00253 132 aa11.45□□□□□ -0.58
CPNE1-222ENST00000473373 RRP8O43159 456 aaKnown RBP11.45□□□□□ -0.58
CPNE1-222ENST00000473373 TCEA3O75764 348 aa11.45□□□□□ -0.58
CPNE1-222ENST00000473373 ANXA9O76027 345 aa11.45□□□□□ -0.58
CPNE1-222ENST00000473373 MPOP05164 745 aa11.45□□□□□ -0.58
CPNE1-222ENST00000473373 CEACAM5P06731 702 aa11.45□□□□□ -0.58
CPNE1-222ENST00000473373 RBP3P10745 1247 aa11.45□□□□□ -0.58
CPNE1-222ENST00000473373 GLB1P16278 677 aa11.45□□□□□ -0.58
CPNE1-222ENST00000473373 TEAD1P28347 426 aa11.45□□□□□ -0.58
CPNE1-222ENST00000473373 RBL1P28749 1068 aa11.45□□□□□ -0.58
CPNE1-222ENST00000473373 RBMS1P29558 406 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms