RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-214ENST00000472398 ST8SIA3O43173 380 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 PI15O43692 258 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 GATCO43716 136 aaKnown RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 AKAP8O43823 692 aaKnown RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 MSCO60682 206 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 VPS4BO75351 444 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 RPS6KA4O75676 772 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 NTSR2O95665 410 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 B3GALT4O96024 378 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 LDLRP01130 860 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 LPLP06858 475 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 YES1P07947 543 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 POLR2CP19387 275 aaPredicted RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 PTNP21246 168 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 PSMA2P25787 234 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 KLRK1P26718 216 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 CD1BP29016 333 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 PER3P56645 1201 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 YWHAEP62258 255 aaKnown RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 ATP2C1P98194 919 aaPredicted RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 SPIBQ01892 262 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 FOXM1Q08050 763 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 PTP4A2Q12974 167 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 DMP1Q13316 513 aaPredicted RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 PDCLQ13371 301 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 KCNAB1Q14722 419 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 NR1D2Q14995 579 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 SGSM1Q2NKQ1 1148 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 HNRNPA1L2Q32P51 320 aaKnown RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 DNAL1Q4LDG9 190 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 MPPE1Q53F39 396 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 AARS2Q5JTZ9 985 aaKnown RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 ZNF484Q5JVG2 852 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 SLC35F1Q5T1Q4 408 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 UBAP2Q5T6F2 1119 aaKnown RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 WLSQ5T9L3 541 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 NADSYN1Q6IA69 706 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 KRT80Q6KB66 452 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 SARM1Q6SZW1 724 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 WDR88Q6ZMY6 472 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 HFE2Q6ZVN8 426 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 SPATA19Q7Z5L4 167 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 ADAMTSL2Q86TH1 951 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 FAM228AQ86W67 206 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 MIB1Q86YT6 1006 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 ZZZ3Q8IYH5 903 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 ULK2Q8IYT8 1036 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 FAM185AQ8N0U4 392 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 FMR1NBQ8N0W7 255 aaPredicted RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 ARFGAP1Q8N6T3 406 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.23□□□□□ -1.89
TTC3-214ENST00000472398 PI4KAP1Q8N8J0 262 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 MLKLQ8NB16 471 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 TP53I13Q8NBR0 393 aaPredicted RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 PPFIBP2Q8ND30 876 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 SRFBP1Q8NEF9 429 aaKnown RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 OR7G1Q8NGA0 311 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 GPBAR1Q8TDU6 330 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 PRPF31Q8WWY3 499 aaKnown RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 HTR3CQ8WXA8 447 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 SPSB4Q96A44 273 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 EAF2Q96CJ1 260 aaPredicted RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 RASD2Q96D21 266 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 DUS3LQ96G46 650 aaKnown RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 FBXL20Q96IG2 436 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 ELMO2Q96JJ3 720 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 DNAJC1Q96KC8 554 aaKnown RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 FCRL2Q96LA5 508 aaPredicted RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 TBC1D32Q96NH3 1257 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 SMOQ99835 787 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 BPIFA3Q9BQP9 254 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 SRSF8Q9BRL6 282 aaKnown RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 FUZQ9BT04 418 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 CNPY3Q9BT09 278 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 PRRG3Q9BZD7 231 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 SEMA4CQ9C0C4 833 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 OPN3Q9H1Y3 402 aaPredicted RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 BLZF1Q9H2G9 400 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 CLEC4MQ9H2X3 399 aaPredicted RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 OR51B6Q9H340 312 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 DHX33Q9H6R0 707 aaKnown RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 ZMAT4Q9H898 229 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 LZTFL1Q9NQ48 299 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 NECTIN3Q9NQS3 549 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 CNGB3Q9NQW8 809 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 BTG4Q9NY30 223 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 WSB2Q9NYS7 404 aaPredicted RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 KCMF1Q9P0J7 381 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 TRPC4Q9UBN4 977 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 KLHL3Q9UH77 587 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 TRPC5Q9UL62 973 aaPredicted RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 USP18Q9UMW8 372 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 PCDHA6Q9UN73 950 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 PACSIN2Q9UNF0 486 aaPredicted RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 NCKAP1Q9Y2A7 1128 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 TDRKHQ9Y2W6 561 aaKnown RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 HBS1LQ9Y450 684 aaKnown RBP3.23□□□□□ -1.89
TTC3-214ENST00000472398 LIPGQ9Y5X9 500 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 CSADQ9Y600 493 aa3.23□□□□□ -1.89
TTC3-214ENST00000472398 GSTTP1A0A1W2PQM5 241 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms